Panicum virgatum (switchgrass): 120639210
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Entry
120639210 CDS
T07260
Name
(RefSeq) probable E3 ubiquitin-protein ligase RNF217
KO
K11975
E3 ubiquitin-protein ligase RNF144 [EC:
2.3.2.31
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120639210
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
120639210
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
120639210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
120639210
NCBI-ProteinID:
XP_039771136
LinkDB
All DBs
Position
6K:38310654..38312054
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AA seq
326 aa
AA seq
DB search
MAAGSSSDGGLIAGVDDFYFSVLAHGRNDDDTVKDELFPISDKKYAAELQLQEVIMSSAV
ATIPPRCGSPAAAASSNNAAAEAAASVHGKGECSYASSSRPSTPPLAFAAAAAAASLVFC
KICMDAVPPSDAHRASRGCAHAFCGGCLARYVGAKIQDRIAGVVCPEQRCGGALDPELCQ
GILPREVFERWGAALCESMLLGAKKTYCPFQDCSAMLLVDEGGGDDVAESECPSCRRLFC
ARCAVAPWHAGVTCAEYKGLRKEDRGKEDMLLLEMAKGRKWKRCPKCEFFVEKRDGCLHI
TCRCGFHFCYGCGGQWGTSHSSCSTA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcagccggatcttccagcgacggcggcctcatcgccggcgtcgacgacttctacttc
tccgtcctcgcccacgggcgaaacgacgacgacaccgtcaaagacgagctcttcccgata
tccgacaagaagtacgccgcggagctccagctgcaggaagtgatcatgtcctccgccgtc
gcgacgatcccgccacgttgcggcagcccggccgcagctgcctctagcaacaacgccgca
gcagaagcggcggcgtcggttcacggcaaaggtgagtgctcctacgcctcgtcgtcccgg
ccgtcgaccccgccccttgccttcgccgccgccgcagccgcggcgtcgctcgtcttctgc
aagatctgcatggacgcggtgccgccctcggacgcgcaccgcgccagccgcggctgcgcg
cacgccttctgcggcggctgcctcgcgcgctacgtcggcgcaaagatccaggaccggatt
gccggcgtcgtgtgccccgagcagcgctgcggcggcgcgctggacccggagctctgccag
ggcatcctgccccgggaggtcttcgagcgctggggcgccgcgctctgcgagtccatgctg
ctgggcgccaagaagacctactgccccttccaggactgctccgcgatgctgctggtggac
gaaggcggcggcgacgacgtcgcggagtcggagtgcccgagctgcaggaggctcttctgc
gcgcggtgcgccgtggcgccgtggcacgccggcgtgacctgcgccgagtacaaggggctc
cggaaggaggacaggggcaaggaggacatgctgctgctcgagatggccaaggggaggaag
tggaagcggtgccccaagtgtgagttcttcgtggagaaacgcgatggttgcctgcacatc
acctgcaggtgtggcttccacttttgctatggatgcggcggccagtgggggacttctcat
tctagttgcagcacagcgtga
DBGET
integrated database retrieval system
