Panicum virgatum (switchgrass): 120639261
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Entry
120639261 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 1-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120639261
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120639261
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Motif
Pfam:
BTB
BACK_BPM_SPOP
BACK
Motif
Other DBs
NCBI-GeneID:
120639261
NCBI-ProteinID:
XP_039771168
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Position
6K:complement(44491194..44492250)
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AA seq
256 aa
AA seq
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MDKAGEPSLNLARRIGVHVFHAGNRKLGWPQFLRQADLAKVYLNDEGHITFVCTVMVLRR
NPIPAPCSDIREHLGSLLNRGDGSDVSFVVAGETFRAHRAVLAARSPVFRVELHGSMAEA
ATPSITQQDITPATFRAMLRFMYTDAFPGDDELGESPSETVQHLLAAADRYALERLKLMC
AQKLWENVSAETVVDALACADMYSCPELKDGCIGFLVEEKIFRKVVLTEGFLNLWQKFPS
TIAEVRERIVGHDDDD
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggccggcgagccgtcgctgaaccttgcgaggaggatcggggttcacgtgttc
cacgcggggaacaggaagctcgggtggcctcagttcctgaggcaagccgacctggccaaa
gtttacctgaatgacgaggggcacatcacgttcgtgtgcacggtcatggtgctacgccga
aaccctatcccggcgccgtgctccgacatcagagagcatctaggcagcttgctgaatcgc
ggagacgggtccgacgtgtcgttcgtcgtcgccggcgagacgttccgtgctcaccgggcg
gtgctcgccgcccggtcgccggttttcagagtggagctccacggttccatggccgaggcc
gcgacgccgtcgatcacccagcaggacatcacccccgcgacattcagagccatgcttcgg
ttcatgtacacggatgcctttcccggagacgacgagcttggggagtctccctctgagacg
gtgcagcatctgctggccgcagctgaccggtacgcactggagcgactgaagctcatgtgt
gcgcagaagctctgggaaaacgtgtcggctgagaccgtcgtcgatgctttagcttgtgct
gacatgtacagctgcccagagttgaaggacgggtgcattggttttcttgtggaggagaaa
atcttcaggaaggtcgtcttaaccgagggttttctgaacttatggcagaagttcccatct
actatagctgaagtgcgagagcggattgtgggacacgatgatgacgattga
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