Panicum virgatum (switchgrass): 120639496
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Entry
120639496 CDS
T07260
Name
(RefSeq) ubiquitin-like-specific protease 1D isoform X1
KO
K16287
ubiquitin-like-specific protease 1C/D [EC:
3.4.22.68
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120639496
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.68 Ulp1 peptidase
120639496
Ubiquitin system [BR:
pvir04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
120639496
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C48
Phage_zn_bind_3
Motif
Other DBs
NCBI-GeneID:
120639496
NCBI-ProteinID:
XP_039771279
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All DBs
Position
7K:1104757..1114442
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AA seq
385 aa
AA seq
DB search
MDVHCELCWRNFSDLVQNFQAHLRDKKTGCAQEAAANGCAECEHHLGRMPPSSPSAGPST
RPSTRQSTGQSSGASTTRSPRQWAYQMSSTSAPEPSTASRRSTSSRGKNVQVVLLDTDTS
IERDGVKVHYPSRGHDDSIELSNEDLSCLESESQLSSPIMNFYIRYLWEQMPSISRIRGN
YHIFNTYFFNKLEDFASKGSEVDSADCFLKLRRWWKGVDIFRKDYILFPVHADAHWSLVI
VCMPAKEDHSGPMVLHLDSLKGQVHQSKNIFIVVDRFLKTEWMHLNGKNLTRKIVKKSIN
VPQQENGYDCGLFALFYMERFIQEAPDRFCRKDLSTVRYYLLLSLFFICMLHCFLEHTRR
IWPSYCVLFSTSLAKDGFDQKRLQS
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggatgtccactgtgaattgtgctggcgcaatttctccgacttagttcaaaattttcag
gctcatttgcgcgacaaaaaaaccgggtgcgcgcaggaagcggctgcaaatggatgtgct
gaatgtgagcatcatctgggccgcatgccgccatcatcaccaagcgccggaccatcaaca
cggccatcaacaaggcagtcaacaggtcaaagctccggggcatcaacaacacggtcgcca
cgtcaatgggcctatcaaatgtcgagtactagtgctcctgagccatcaacagcttctaga
cgaagcacctcatcaagaggcaaaaatgttcaagttgttctattggacacagatacatcc
attgaaagggatggagtgaaggtacactatccttcaaggggacatgatgattccatagaa
ctttctaatgaagatctatcatgccttgagtctgaatcacaattgtcctcgcctataatg
aacttttacattaggtacctatgggaacaaatgccatcaattagtagaataagaggcaat
taccacattttcaacacatacttcttcaacaaacttgaagactttgcatcaaagggttca
gaggtggacagcgctgattgtttcttaaagctgagaagatggtggaagggtgtggatata
tttaggaaggactatatactgtttcctgtgcatgcagatgcacactggagcttggtcatc
gtatgtatgccagccaaagaagaccactctggacccatggtgcttcatttggattcactg
aaggggcaggttcaccagagcaaaaatattttcatcgtcgttgacagattcttgaaaacg
gaatggatgcacctgaatggaaagaaccttactagaaaaattgtgaaaaaatcgatcaat
gttccacaacaggaaaatggatatgactgtggtctgtttgctttattctatatggagcgt
tttatccaggaggcacctgacaggttttgcaggaaagacctttctacggttagatactat
ttgttgctttctttattttttatatgtatgcttcactgctttctagaacacactcgccgg
atctggccatcttattgtgtcttattttctactagtttggcaaaagatggtttcgaccag
aagaggcttcagagttga
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