Panicum virgatum (switchgrass): 120639607
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Entry
120639607 CDS
T07260
Name
(RefSeq) transcription factor E2FB-like
KO
K06620
transcription factor E2F3
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120639607
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
120639607
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Gene cluster
GFIT
Motif
Pfam:
E2F_CC-MB
E2F_TDP
TrmB
Methyltransf_19
APG6_N
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
120639607
NCBI-ProteinID:
XP_039771408
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All DBs
Position
7K:complement(3901897..3906791)
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AA seq
481 aa
AA seq
DB search
MDGGSSSLPLPHPPQVYLRRPVPPPGPPVTAPPRVHLFRPPVPIPIFSSRPRSAAWPPIP
PPPAAAPAPAPQVAAAPAPPRPPPAAPTSTSADKPPSPPPPAQPQAGLMLPPPAPRAEGK
GTPMPNPQPNEQNNGGENSQAEINMGETAQDKETTSEPGKVIKRVKKLKVSKQSVGTSHG
SGVVEGDAGPSLHLINHCRYDSSLSLLTKKFINLLQGAENGTLDLNKAAESLEVQKRRIY
DITNVLEGVDLIEKGLKNMIHWKGFDMSKPKEIECQISSLKEELESLYDEEFRLDDEIRE
AKEKLQALTLDEDKRKSLYLLKEDINKIPHFQGSTLIAINAPHGTCVEVPDPNADLYLYG
DLGLQEKHYKIVLRSSMGPIDCYLISDQQEIFNPDQQVAAGKLEPVVATGSSQAVQQMDS
DLNQTPEKGQSNAVRTHTSEPSRKHELMSGILRIVPADADADSDYWLASDVDVSMTDAWG
T
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggacggcggctcctccagcctgcccctcccccacccgccgcaggtctacctccgccgc
cccgtgccgccgcccggcccgcctgtcaccgctcctccgagggtccacctcttccgcccc
ccggtgcccatccccatcttctcctcgaggccccgctccgccgcgtggcccccgattcct
cctcctcctgctgctgctccagctcccgctccccaagtggccgcagcgccggcgccccct
cggccgcctcctgcggcccccacctccacctccgccgacaagccgccgtcgccgcctcct
ccggcccagccgcaagctggtttgatgctcccgcctccggctcctagagcggaggggaag
gggacacccatgcccaacccacagccgaatgagcaaaacaatggaggagaaaattctcaa
gctgaaatcaacatgggagagactgctcaagataaggagactacctctgaaccagggaaa
gttatcaaacgggtaaagaagctaaaggtttctaaacagagcgtgggcacctcacatggt
tcaggagttgttgaaggagatgctgggccttcattacatttgataaaccactgccgctat
gacagctcactaagtctgctcacaaagaagttcatcaacctgcttcaaggagcagaaaat
ggaacccttgatttgaataaagcagctgagtcgctggaggtgcaaaagaggaggatatat
gatataacaaatgttctagaaggtgttgatttaattgaaaaaggacttaagaatatgatt
cactggaagggatttgacatgtcgaagcctaaggagatagaatgccaaatttcctcattg
aaggaggaacttgaatctctttatgacgaagagttcaggttggatgatgaaataagggaa
gcaaaagagaaactacaagccctcacactggatgaggacaaaagaaagtcgttatatctt
ttgaaggaagatataaataagattcctcactttcagggatccactcttattgctataaat
gctcctcatggaacatgtgttgaagttccagaccctaatgcggatttgtacttgtatggg
gacctgggtttgcaagagaagcattacaaaattgtcttgagaagttcaatgggtcccatt
gattgctatttaataagtgatcaacaggagatatttaacccagatcagcaggtggcagcg
ggcaaattagaacctgtggtcgccactggcagttctcaagctgtgcagcagatggattct
gatctaaatcagacaccagaaaagggtcagagcaatgctgttcgcacgcatacttcagaa
ccttctagaaagcatgagctcatgtctggcattctgagaattgttccagcagatgccgat
gctgactctgattactggctcgcttctgatgtcgatgttagcatgacagatgcatggggc
acatag
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