Panicum virgatum (switchgrass): 120639613
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Entry
120639613 CDS
T07260
Name
(RefSeq) magnesium-chelatase subunit ChlH, chloroplastic
KO
K03403
magnesium chelatase subunit H [EC:
6.6.1.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00860
Porphyrin metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
120639613
Enzymes [BR:
pvir01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.1 magnesium chelatase
120639613
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CobN-Mg_chel
DUF3479
Motif
Other DBs
NCBI-GeneID:
120639613
NCBI-ProteinID:
XP_039771414
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All DBs
Position
7K:complement(4032961..4038692)
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AA seq
1393 aa
AA seq
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MASSSLVSTPFAGAAAAQKRLLPAPAPAPHSFLLSSARRHTPSGARRGGAATSTIRCAVA
GAGNGLFTQTKPEVRRVVPGPDPRLPRVKVVYVVLEAQYQSSVTAAVQQLNADPRRAAAF
EVVGYLVEELRDEDTYRTFRADLADANVFIGSLIFVEELALRVRDAVQEARDRLDAVLVF
PSMPEVMRLNKLGSFSMSQLGQSKSPFFQLFKRNKANAGNFADSMLKLVRTLPKVLKYLP
SDKAQDARLYILSLQFWLGGSPDNLQNLFKMVAGSYVPALRAAGGIAYDDPVLYLDAGIW
HPLAPQMYEDVKEYLNWYGTRRDAGDGLRDPDAPVIGLVLQRSHIVTGDDAHYVAVIMEL
EARGARVIPIFAGGLDFSGPTQRFLVDLVTGKPFVNAVVSLTGFALVGGPARQDHPKAIA
ALQKLDVPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGMEPIVFAGRDPRT
GKSHALHKRVEQLCTRAIRWAQLKRKTKEKKKLAITVFSFPPDKGNVGTAAYLNVFNSIY
SVLSDLKKDGYNVEGLPDTPEALIEEVIHDKEAQFNSPNLNVAYRMNVREYQSLTPYASL
LEENWGKPPGHLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAA
YYTFVEKIFQADAVLHFGTHGSLEFMPGKQVGMSDTCYPDSLIGNIPNIYYYAANNPSEA
TVAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGAQIVSSIISTAKQ
CNLDKDVPLPEEGEELPAKERDLIVGKVYAKIMEIESRLLPCGLHVIGEPPSAIEAVATL
VNIAALDRPEDGISSLPGILAATVGRGIEDVYRGSDKGILADVELLRQITEASRGAITAF
VEKTTNSKGQVVNVANNLSTILGFGLSEPWVQYLSTTKFIRADREKLRVLFGFLGECLKL
VVQDNELGSLKLALEGSYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTAAALKSAKIV
VDRLLERQKVDNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRPVADTFGRVNRVE
PVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPVEMNYVRKHAQEQA
EELGVSLREAATRVFSNASGSYSSNVNLAVENASWTDEKQLQDMYLSRKSFAFDSDAPGA
GMKEKRKAFELALATADATFQNLDSSEISLTDVSHYFDSDPTKLVQGLRKDGRAPSSYIA
DTTTANAQVRTLSETVRLDARTKLLNPKWYEGMMKSGYEGVREIEKRLTNTVGWSATSGQ
VDNWVYEEANSTFIEDEAMRKRLMDTNPNSFRKLVQTFLEASGRGYWETSEENLERLREL
YSEVEDKIEGIDR
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcgtctctagtgtccacccccttcgccggggcggcggcggcgcagaagagg
ctgctcccggcgcccgcgccggcgccgcactccttcctgctcagcagcgcgcgccgccac
accccctccggcgcccgccgcggcggcgccgccacctccaccatccgctgcgccgtcgcc
ggcgccggcaacggcctcttcacgcagaccaagcccgaggtgcggcgcgtggtcccgggc
ccggacccgcggctgccgcgcgtcaaggtcgtctacgtggtcctcgaggcgcagtaccag
tcgtcggtcaccgccgccgtgcagcagctcaacgccgacccgcgccgcgccgccgccttc
gaggtcgtcggctacctcgtcgaggagctccgcgacgaggacacctaccgcaccttccgc
gccgacctcgccgacgccaacgtcttcatcggctcgctcatcttcgtcgaggagctcgcg
ctcagggtccgcgacgccgtccaggaggcccgcgaccgcctggacgccgtcctcgtcttc
ccctccatgcccgaggtcatgcgcctcaacaagctcggctccttcagcatgtcgcagctg
ggccagtccaagagcccattcttccagctcttcaagcgcaacaaggccaacgccggcaac
ttcgccgacagcatgctcaagctcgtgcgcacgctgcccaaggtgctcaagtacctgccc
tccgacaaggcgcaggacgcgcggctctacatcctcagcctccagttctggctcggcggc
tcgccggacaacctccagaacctcttcaagatggtcgccggcagctacgtgcccgcgctc
cgcgccgccggcggcatcgcctacgacgaccccgtgctgtacctcgacgccggcatctgg
cacccgctcgcgccccaaatgtacgaggacgtcaaggagtacctcaactggtacggcacg
cgccgcgacgccggcgacgggctccgggaccccgacgcgcccgtcatcggcctcgtcctc
cagcggagccacatcgtcaccggcgacgacgcccactacgtggccgtcatcatggagctc
gaggccaggggcgccagggtcatacccatattcgccggcggcctcgacttctccgggccc
acgcagcgcttcctcgtcgacctggtcaccggcaagccgttcgtcaacgccgtcgtctcg
ctcaccgggttcgcgctcgtcggcgggccggccaggcaggaccaccccaaggccatcgcc
gcgctgcagaagctcgacgtgccttacattgtcgcgctgccgctcgtgttccagaccacg
gaggagtggctcaacagcacgctggggctgcaccccatccaggttgcgctgcaggtcgca
ctgccggagctcgacggagggatggagcccatcgtcttcgccggcagggacccaaggaca
gggaaatcacatgcactgcacaagagggtcgagcagctctgcaccagagcaatcagatgg
gctcaactcaagaggaaaactaaggagaagaagaaacttgcaatcactgttttcagcttc
ccaccagacaagggcaacgttgggactgcagcctatctgaatgtgttcaactccatctac
tctgtcctctcagacctcaagaaggatgggtacaacgttgagggtcttccggatacacct
gaagccctcatcgaggaggtgatccatgacaaggaggcccagttcaacagccccaacctc
aatgtcgcttaccgcatgaatgtgcgggagtaccagtctctcactccctacgcctccttg
ctggaggagaactggggcaagccaccgggtcacctcaactctgatggtgaaaacctcctt
gtctatgggaagcagtatggcaatgtcttcattggcgtgcagcccacttttgggtatgaa
ggtgacccgatgcggctcctgttctccaagtctgccagccctcaccatggcttcgcggca
tactacaccttcgttgagaagatcttccaggcagatgctgttctgcacttcggcacacac
ggatcccttgagttcatgccgggcaaacaggttgggatgagtgacacctgctaccctgac
agtctcattggcaacatccccaacatctactactacgccgcaaacaacccttcagaggcc
accgtcgccaagcgccggagctacgcaaacaccatcagctacctgacaccaccggccgag
aatgccggtctctacaaggggctcaagcagctgtcagagctcatctcctcttaccagtct
ctcaaggacaccggccgtggtgcgcagattgtgagctcaatcatcagcactgcaaagcag
tgtaaccttgacaaggatgtcccgttgcctgaggaaggcgaggagctcccagcaaaggag
cgtgacctcattgttggcaaggtgtacgccaagatcatggagattgaatcaaggctcctg
ccctgcggtctgcacgtcatcggtgagccgccgagcgccatcgaggctgtggccacactg
gtgaacattgccgcccttgaccgcccggaggatggcataagctcactgcccggcatcctt
gctgcaacagtgggccggggcattgaagatgtgtacaggggaagtgacaagggcatactg
gctgatgttgagcttctgaggcagataactgaagcctcacgtggtgccatcactgccttt
gttgagaagaccacaaacagcaaagggcaagtcgtcaatgtggctaacaatctcagcacc
attcttgggtttggtctctcagaaccgtgggtgcagtacctgtccacgaccaagttcatc
agagcagacagagagaagctgagggtcctgtttggattcttgggggagtgcttgaaactc
gttgtgcaggacaatgagcttggcagcctgaagcttgccctcgagggaagctatgttgag
cctggccctggtggcgatccgatccgtaacccgaaggttctcccaactgggaagaacatc
catgctcttgacccgcaggcgatcccaactgcagctgccctgaagagtgccaagattgtt
gttgaccgcctgctggagaggcagaaggttgacaatggtggcaagtatcctgagacggtt
gcacttgtcttgtggggcactgacaacatcaagacctacggtgagtcgttggcccaggtg
ctgtggatgatcggtgtccggcctgtggctgacacctttggccgtgtcaaccgtgtggag
cctgtcagccttgaggagcttggacgccccaggattgatgtcgtcgtcaactgctcgggt
gtcttcagggatcttttcatcaaccagatgaacctgttggaccgtgcagtgaagatggtc
gccgaactggatgagccagtggagatgaactacgtgcgcaagcatgcccaggagcaggca
gaggagctgggcgtctcgctgagagaggcagcaacaagggtgttctccaacgcatccggc
tcctactcatccaatgtgaacctggcagtggagaacgcatcgtggaccgacgagaagcag
ctccaggacatgtacctgagccgcaagtccttcgccttcgacagcgacgctccgggggca
ggcatgaaggagaagcgcaaggcgttcgagcttgccctggccaccgccgacgccacgttc
cagaacctcgactcgtcggagatctcactcacggacgtgagccactacttcgactccgac
ccaaccaagctcgtgcaaggcctgcgcaaggatggccgggcgccttcctcgtacatcgcg
gacaccaccacggcgaatgcgcaggtgagaacgctgtcggagacggtgcggctcgatgcg
aggacgaagctgctcaaccccaagtggtacgaggggatgatgaagagtgggtacgaggga
gtcagggagatcgagaagcggctcacaaacactgtcgggtggagcgcaacatccggacag
gtggacaactgggtttacgaggaggccaattccacgttcatcgaagatgaggcgatgagg
aagaggctcatggacaccaaccccaactcgttcaggaagctggtccagaccttcctagaa
gccagcggcagaggctactgggagacatcggaggagaacttggagaggctccgggagctc
tactcggaggttgaggacaagatcgagggaattgaccggtaa
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