Panicum virgatum (switchgrass): 120639672
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Entry
120639672 CDS
T07260
Name
(RefSeq) transcription factor RAX2-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120639672
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120639672
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120639672
NCBI-ProteinID:
XP_039771466
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Position
7K:complement(6153419..6156043)
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AA seq
324 aa
AA seq
DB search
MGRAPCCDKNNVKKGPWSPEEDAKLKEFIEKHGTGGNWIALPQKAGLRRCGKSCRLRWLN
YLRPNIKHGEFTEQEDRVICSMYASIGSRWSIIASQLPGRTDNDIKNYWNTKLKKKLLGS
TATPPLPRAPRQHHRPLNLMLQHTSPSLPQPTYNSFFSSAGALLDPISGIPSLTLPPPQD
YMLNSGCLAIPNAPSLLHGHGAPQQQFHHHVVKEESGNMIAFGSDQQSCSSSDGMHSQPQ
FGHGKALSFDGYFGYNNGSSIVQEHRMLQLHDHHQAQQVPVEYNYEEIKQLLLSSTTNGN
LHGHGHGQDGSMEGFGSQGKVTMM
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggggagggctccgtgctgcgataagaacaatgtgaagaaagggccatggtctcctgag
gaggatgccaagctcaaggagttcatcgagaagcacggcaccggtgggaattggattgct
cttcctcaaaaagcagggctaagaagatgtggcaagagctgtaggcttagatggttaaac
tacctgaggcctaacattaagcatggggagttcactgagcaagaagacagggtcatctgc
agcatgtatgcaagtataggaagcaggtggtcaatcatcgcgtctcagctccccggtcgc
actgacaatgacatcaagaactactggaacaccaagctaaagaagaagctcctaggctcc
acagccaccccaccccttccccgtgcgccgcggcagcatcaccggcccctcaatctcatg
ctccaacacacgtcaccctcgttaccccaacccacctacaacagcttcttctccagcgcc
ggagccctcctcgaccccatcagtggcatcccatcattaacactgccgccaccccaggat
tacatgctaaactccggctgccttgccattccaaacgcgccttcacttctgcacgggcac
ggcgctccacagcagcagtttcaccaccatgtggtcaaggaggagagcggcaacatgatc
gcattcggcagcgaccagcagagctgcagctcctcagacggcatgcacagccagccgcag
ttcgggcatggcaaggcgctgagctttgacggctacttcggctacaacaatggaagcagc
atcgtgcaagaacacaggatgcttcaactccatgatcatcaccaggcccagcaggtgccg
gtcgagtacaactacgaggagatcaagcagctgctattgagctcaacaaccaacggtaat
ttgcatggccatggccatggccaggacggcagcatggaagggttcggctcgcaagggaag
gtgacgatgatgtaa
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