Panicum virgatum (switchgrass): 120639703
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Entry
120639703 CDS
T07260
Name
(RefSeq) protein AAR2 homolog isoform X1
KO
K13205
A1 cistron-splicing factor AAR2
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120639703
Spliceosome [BR:
pvir03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120639703
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAR2
AAR2_1st
Motif
Other DBs
NCBI-GeneID:
120639703
NCBI-ProteinID:
XP_039771514
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Position
7K:7386877..7402168
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AA seq
402 aa
AA seq
DB search
MASGGGGAAARMDPEAATELVRKGSTLLLLDVPQRTLFGIDTQVFSVGPKFKGMKMVPPG
PHFVYYCSSSRSGNEFAPTVGFFLITQPSEVIVRKWDAQEERLIKLSEEEEIRYSEAVRR
FEFDDQLGPYNLDSYGDWKQLSSYLSQSAIERLEPIGGEITIALESSWMDKAPQSDMERR
LMEQLRESKFTKTAPVQAEQRGCYYTSIPASVKHKNVSGGDLTALNLDKTSLLESVLAKN
YQGQEDLLLGELQFAFIAFMMGQSLEAFMQWKALVSLLLSCSEAPLHTRTNLFVKFLRTF
YYQLKHGFQRTQDSRNDDVSNSLFLDEAWFSRDIFLYRLSKDFFTVVFEAPVVDGDLLSW
ARKLKTLLETTFGWDLEDNAMNLIDEDDEECLACVYAKVLTL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggcggcggcggcgctgcggcgcggatggacccggaggcggcgacggagctg
gtgcgaaagggctccacgctcctcctgctcgacgtccctcagcgcacgctcttcggaatc
gatacgcaggtgttctctgtcgggcccaagttcaaagggatgaagatggtgcctccgggg
ccccatttcgtctactactgctcctccagcaggagtgggaatgagtttgcgcctactgtc
ggtttctttcttattactcaaccatctgaggtgattgttcgaaagtgggatgcacaagag
gagaggttaatcaaattgtcagaagaggaggaaatcagatactctgaagcagtaaggcgc
tttgagtttgatgatcagcttggaccatacaatttggattcttacggagattggaaacaa
ctttcaagctacttgtcacagagtgccattgagcgtcttgaaccaattggaggggaaatt
acaattgcgttggagtcatcatggatggataaagctccccaaagtgacatggagagacgc
ttgatggaacaattgagagagagcaagtttacaaaaaccgctcctgtgcaggctgagcag
agaggatgctactacacaagtatccctgcctcagttaagcataagaacgtctccggtggt
gacttgacagcactgaacttggacaaaacaagcttgctggaaagtgttttggccaaaaat
tatcaaggccaagaagatttactcttgggggagttgcagttcgctttcatagcttttatg
atgggccaatcgctggaggctttcatgcagtggaaagcattagtcagtcttctcttgagc
tgtagtgaagctcctcttcatacaaggactaacctgtttgtaaagtttcttaggacattt
tactatcagctcaagcatgggtttcaacgtacccaagattccagaaatgatgatgtgagc
aactctctgtttttggatgaagcatggttttcaagagacatattcctgtaccgtctttcc
aaggatttctttacagtagtatttgaagcccctgtcgtggatggagaccttctatcatgg
gctagaaaactaaaaacacttctggagactacatttggatgggatctcgaggacaatgca
atgaacctcattgatgaagatgatgaggagtgtctggcctgtgtatatgcgaaagttttg
actctatag
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