Panicum virgatum (switchgrass): 120639864
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Entry
120639864 CDS
T07260
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 15c
KO
K14972
PAX-interacting protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120639864
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL3/MLL4 complex
120639864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med15_C
Motif
Other DBs
NCBI-GeneID:
120639864
NCBI-ProteinID:
XP_039771728
LinkDB
All DBs
Position
7K:5042849..5048028
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AA seq
969 aa
AA seq
DB search
MGSHMRPVNAVVHAINGGNSSITAQVPSISTQGSQPSQLQGLPMTSLVSSLVPNQNVVCP
SAQNMHVKVKQEHPEVTRKPDQTLNSRQASTTPSAPSVQLSQQMVAPVASEKLKELALQM
QPSDFSGRNPINITQPHGQPLVQPNVQQNPFVKNGMLPKELMMVNQKGLGLNQQQTDRQH
LKYQMRVAQQTNITKVHNGHPGVRNAQPGVTVGLRSTLRMHEQEALSEHIEIESQPMAIP
QQLITATTMGSAGEVDWREEMFQKIKPLKDAYLSELMELDKAIVVPKLSQKQLDSLPNER
AQQYRYRLHLKQKTKLMVKFLLLQKSSIPDNLRGQLSKFLKSIQDLLGFYRRSKHLTMDA
RNRCQISQGQPKIINLIGDQAPSSGGTCHQNQQEQPVNSQLMKDTITTTPAAQEINSNSL
LGVESSCFPEKTRGSLQSLPIDKLQECCTQTLSFAIKAGPVKVSSPYASLVSTSPSHIST
PRDAKPTTSSSVSVKSTLPSPVAKPGLVKVSCASVNSMLPSSFTESTSIQAVSPCASAKS
SLPSSTFAKPSVIETTSSVTNSGCDPVALSCPSVHPTPSDNFESFSALLLQDISATTSAQ
TVVGRTATTAENCIKQVTTIKPIMQASSLLAETVDDQAKDNEHPGNEIPVAKKSIDRLLD
AVRTSSPAMLCSAANSLRSVLNMNNWVQQSEMDTSEDWSFFSEQCGSSTANKRKRGLEST
SLYSESAPQGIMGAICLTFDCTASEAEYSAERGARRQKTQNAKDTLLDEINSANSMLLDT
FISIADDYGTDAISSSSGGTLIKLFYTATSLAPDLASLFATPGGMCIVMPVKLLVPADYP
RSSPRFVCDQGDEQMRKRFNDISGTLDIAFRQALYGLPDPMSVLDIAKAWDASVRRAVVE
FAKMHGGGTFSSSYEKKIQDIANSNSNSRNPNHIGTQADQSSSPMKRTGITHPVLETVEA
ESQSGTMGQ
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgggaagccatatgcgtccagttaatgcagttgttcatgcaatcaatggaggtaattca
tcaattactgcacaagtgccatcgatttctactcaaggaagtcaaccttctcagctgcaa
ggccttcctatgacatctttagtttcgagcctagtgccaaaccagaacgtggtttgtcct
tcagcgcaaaacatgcacgtcaaggttaagcaagaacatccagaggttacaagaaagcca
gatcagactcttaactcgcgacaagcatcaacaactccatcagcaccaagtgtccaactc
agtcagcagatggtagcaccagttgcatctgaaaagttgaaggaactagccttgcaaatg
cagccctcagacttttcaggacgtaacccaataaacattacacagccacatggacagcca
cttgttcaaccaaatgttcagcagaatcccttcgtgaaaaatggtatgctgccgaaggaa
ctcatgatggtgaatcaaaaaggtttggggttaaaccaacaacagacggataggcaacat
ttaaagtaccaaatgcgggtggcacaacaaaccaacatcactaaggtgcacaatggtcat
cctggagtacggaatgctcaacctggggtaacagttggattacggtcaacgttgagaatg
catgaacaagaggcactcagtgaacatatcgaaatagaatctcagcctatggccatacct
cagcagctgatcactgccacaactatgggaagtgctggagaagttgattggagggaggaa
atgtttcagaagatcaagccactaaaggatgcttacctttcagagctcatggaactggat
aaagccattgttgttccaaaactttcacagaagcagcttgattcattacccaatgaaaga
gctcaacaatacagatatagattacacttgaagcagaaaacaaaactgatggtgaaattc
ttactgctacaaaaaagcagcatccctgacaacctcagggggcagctctccaagtttttg
aagtccatacaagatttactaggtttctacaggagaagtaaacatctaacgatggatgca
agaaataggtgccagatttctcaagggcagcctaaaataatcaatcttattggtgatcag
gctccttccagtggtggtacatgccatcaaaatcagcaagaacaacctgtaaattcccag
ttgatgaaggatactatcactacgacaccagcagctcaagaaatcaatagcaacagcttg
ttaggagtagaaagctcttgtttccctgaaaagacacgaggatcgttgcagtctttgcca
atcgataagcttcaggagtgttgcacacagacactttcatttgctatcaaggcaggccct
gtaaaagtctcttcaccttatgcttctctggtgtccacatccccatcacacatttctacg
cctagggatgcaaaacctacaacctcatcctcagtttctgtgaagtccactttgccatca
ccagttgccaagccaggtcttgtaaaagtgtcatgtgcttcagtaaactctatgttgcca
tcatcatttaccgaatctacttctatacaagctgtgtcaccatgtgcttcagcaaaatca
tcattgccatcatcaacctttgccaagcctagtgttatagaaaccacttcatccgttacc
aattcaggttgtgatccagttgctttgtcctgtccttcagtgcaccctacaccatctgac
aacttcgagagtttttctgccttactactacaagacatctcagccactaccagtgcacag
acagtggtaggaagaacagcaacaactgcagaaaattgtattaaacaggtcactaccatt
aaaccaatcatgcaagcctcatcacttctggcagaaactgtagatgatcaagcaaaggat
aacgagcaccctggaaatgaaataccggtggctaagaaatccattgatcgcctacttgat
gcggtgcgaacttcatcgccagcaatgctttgcagcgcagctaattccctccgctcagtc
ctcaacatgaacaattgggtacaacagagtgaaatggatacatctgaggattggtcattc
ttctcagagcagtgtggatctagcactgcgaacaaaaggaagcgtggtttggaaagtaca
tcattgtattctgaatcagcaccacagggcatcatgggtgcaatttgcttgacatttgat
tgcactgcctctgaggctgaatatagtgcagaacgcggtgctaggaggcaaaaaacacag
aatgctaaggatactctgttagatgaaataaactctgcaaacagcatgctgttagatacc
tttatcagcatcgccgatgactatggaacagatgcgatttcctctagcagtggtgggaca
ctgatcaagctcttctacactgccacatcactcgcaccagaccttgcatcgctctttgca
acacctggtggaatgtgtatcgtcatgcccgtgaagctcttggtccccgcagattatcca
agaagctctcctaggtttgtctgtgaccagggtgatgagcaaatgaggaagaggttcaat
gacatttctggcacgctggacatagccttccggcaggccctctatggactcccagatccc
atgtctgtcctggacatcgcaaaggcttgggatgcctccgtacggagggccgtcgtggag
ttcgcaaagatgcacggcgggggaacgttcagctccagttacgaaaaaaagatccaggac
attgccaactccaactccaactctagaaaccccaatcatattgggacacaagcagatcag
tcctcatcgccgatgaagaggacggggatcacgcaccctgtcctggagaccgtcgaggcc
gagtcccagagtggcacaatggggcagtga
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