Panicum virgatum (switchgrass): 120639888
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Entry
120639888 CDS
T07260
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03020
RNA polymerase
pvir03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120639888
09124 Replication and repair
03420 Nucleotide excision repair
120639888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120639888
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120639888
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
120639888
DNA repair and recombination proteins [BR:
pvir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
120639888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
120639888
NCBI-ProteinID:
XP_039771748
LinkDB
All DBs
Position
7K:complement(8358740..8359396)
Genome browser
AA seq
86 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTIEREDHTIGNIVRMQLHRDPNVLFAG
YKLPHPLQYKIITRIHTTSQSSPTQH
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctccggatcgctacgagcgctttgtcgtgcctgagggcaccaagaaggtgtcg
tatgagagggacacaaagatcgtgaatgctgcctcattcactatcgagcgtgaggaccac
accattggcaacattgtccgcatgcagctgcacagagacccaaatgtgctctttgctggc
tataagctccctcacccacttcagtacaagatcatcacgaggatccatactaccagccag
tcttccccaacgcaacactag
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