Panicum virgatum (switchgrass): 120640052
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Entry
120640052 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 1-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120640052
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120640052
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GFIT
Motif
Pfam:
BACK_BPM_SPOP
BTB
MATH_2
BACK
Motif
Other DBs
NCBI-GeneID:
120640052
NCBI-ProteinID:
XP_039771879
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Position
7K:25794447..25795610
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AA seq
352 aa
AA seq
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MASDSGDPTNCGATTILAASSYHVIRIDGYSRSLNTQGNRPSFNSDPFRAGGRTWHVIYK
PMGSPCCPENTEHISLFLALDDDLADGEVVVARGTFSLLDRDRKVTGAERFVRRQDLERS
EHLKGDCFAVRVHVCIFKGAPPVAVPPPDIHRHLGGLLSGEEGTDVEFRVRGETFAAHRF
VLGARSPVFRAELLGPMKEGTATDAVQVEDMEPQVFHGLLTFVYTDAWPETEEEDECVMA
QHLLAAADRYDLPRLKLMCQDKLRQRMDASSVASILALAEQHRCPRLKEACFKFLAFSSV
AFLEAIASEEFEYLARSCPSVTRELISGLLARDLEKTTLGELCSRIPLFRGL
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgattccggcgacccgacgaactgcggcgccaccaccatcctcgcggcgagc
tcctaccacgtgatcaggatcgacggctactcgagaagcttgaacacccagggcaaccgg
ccctccttcaactcggacccgttccgtgcgggaggccgtacctggcacgtcatctacaag
cccatgggaagcccgtgctgcccggaaaacaccgagcacatctccctcttccttgctctc
gatgacgacctcgccgatggtgaggtggtggtggccaggggcacattcagccttctcgac
cgggacaggaaggtcacgggagcagagaggttcgtcaggaggcaggacctggagcgatcc
gagcacctcaagggcgactgcttcgccgtcagggtacacgtctgtatcttcaagggagcg
ccacccgtcgccgtgccgccgccggacatccaccggcatctcggtggcctcctgtccggc
gaggagggcaccgacgtcgagttccgagtccgcggggagacgttcgccgcgcaccggttc
gtgcttggggcccggtcgccggtcttcagggcggagctcttgggcccaatgaaggagggc
accgccacggacgccgtgcaggtggaagacatggagccgcaagtgttccacggtttgctc
actttcgtgtacacggatgcatggccagagactgaggaagaagacgagtgcgtcatggct
cagcatctgctcgccgccgcggacaggtacgacctgccgaggctgaagctgatgtgccaa
gacaagctgcgccagcgcatggacgcaagctccgtggcgtccatcttggcgctcgcggag
cagcaccggtgtcctcgcctcaaggaggcatgcttcaagttcctcgccttctcctcggta
gctttcctcgaggccattgcgtcagaagagttcgagtacttggcccggagctgcccatct
gttaccagggagctaatttccggccttcttgctcgtgatctcgaaaagacaacattagga
gaactttgctcccggatacctttatttcgcggcttatga
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