Panicum virgatum (switchgrass): 120640061
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Entry
120640061 CDS
T07260
Name
(RefSeq) chloride channel protein CLC-f-like isoform X1
KO
K03281
chloride channel protein, CIC family
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120640061
Transporters [BR:
pvir02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
120640061
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
120640061
NCBI-ProteinID:
XP_039771890
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All DBs
Position
1K:complement(49250355..49255573)
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AA seq
778 aa
AA seq
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MSACDDDHASLLRSHASGAPLPPSCPSPRGGAAGHQQQQHHADVEADEATVTASPRRAGG
VRGLLRHLERRMSARGSGHGRRPHQQHYQQLDRPVLAEQPSQRQWERPDAGEDDELGDGA
PPEWALLLIGCLLGLATGICVAAFNRGVHVIHEWAWAGTPNEGAAWLRLQRLADTWHRIL
LIPVTGGVVVGMMHGLLEVFEQLKLVKSGQRQGINFLGAIFPTVKAIQAAVTLGTGCSLG
PEGPSVDIGKSCANACSEMMENNRERRIALVAAGAAAGIASGFNAAVAGCFFAIETVLRP
LKAENSPPFTTAMIILASVISSTVSNVLLGARPAFIVPAYELKSAAELPLYLILGMLCGA
VSVVFDRLVAWFSRLFGRIKEKFDFPIIVYPALGGLGAGLIALKYPGILYWGFTNVEEIL
HTGKSASAPGIWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIGAAVGAVFGGSAAYLI
NSAIPGNAAVAQPQAYALVGMAATLASVCSVPLTSVLLLFELTKDYRILLPLMGAVGLAI
WVPSVVNQPNDNEPSGFRTPRRGYSSVSSEDRNGSSKRADVADDLELSIIQSDVNNYGTY
NEEMLLDDLKVSQAMSKLYVKVLPSATVTEAFKLLHDNQQNCALVVDPEDYLEGIITLGD
IRRMGFELHEESFIDGDYPKTDNSSSISSLVTRGFQYQGSERGLLTCFPDTDLTTAKNLM
EARGIKQLPVVKRGVGHRTTGKRKPIALLHYDSIGSCLRLVISLYPFSQSLQFFVLLN
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctgcgacgacgaccacgcctcgctcctcagatcccacgcgtccggcgcgccg
ctgccgccctcctgcccctcgccgcgcggcggggcggcggggcaccagcagcagcagcac
cacgccgacgtcgaggccgacgaggccaccgtcaccgcctccccgaggcgcgccggcggc
gtgcgcggcctcctgcgccacctcgagcgccgcatgtccgcgcgcggatccgggcacggg
cgccgcccgcaccagcagcactaccagcagctcgaccgccccgtgctggccgagcagccg
tcgcagcggcagtgggagaggcccgacgcgggggaggacgacgagctcggggacggcgcc
ccgcccgagtgggcgctgctgctcatcggctgcctcctcggccttgccaccggcatctgc
gtcgccgcgttcaaccgcggggttcatgtcatccatgaatgggcatgggcaggtactccc
aacgaaggtgcagcttggctccgccttcagaggctagctgatacgtggcacaggatatta
ttgatcccggtgaccggaggtgtggttgtaggaatgatgcatgggttgctcgaggtattt
gagcagctaaaacttgtgaaatcagggcagaggcaagggatcaactttcttggagcaatc
ttcccaaccgtaaaggctatccaggctgctgttactctagggactggctgttcattgggc
cctgaaggtcctagtgtggatattggcaagtcatgcgcaaatgcatgctcagaaatgatg
gagaataaccgggaaagacggattgcccttgttgctgctggtgccgctgctggcatcgca
tcaggcttcaatgcagctgttgctgggtgcttctttgccattgaaactgtattgaggccc
cttaaagcagaaaattcacctccatttacaactgcaatgataatattggcatctgttata
tcatccactgtatcaaatgttttgcttggagcaagaccagcttttatagtgccagcatat
gagctaaaatctgctgcagagctacccctgtatctcatcttaggaatgctctgtggagca
gtcagtgtggtatttgaccgactggtagcgtggttttcaaggttatttgggcggataaag
gaaaagtttgattttcctattatagtgtaccctgctttgggtgggctgggggcaggcctc
atagctctgaaatatccagggattttatactggggtttcacaaatgttgaagaaatattg
catactgggaaaagtgcttctgctcctggtatctggttgttaactcaactcgcagctgca
aaggtagttgcaaccgccctctgcaagggctctggcctcgtgggagggctatatgctcca
agcctgatgattggggctgctgttggagctgtatttggaggctcagctgcttatttaata
aattcagctatacctggtaatgctgctgttgcacagccacaggcctatgctctggttgga
atggctgcaacactagcttcagtttgttcagtgccattgacttcagtgttgcttctcttt
gagctgacgaaggattacaggattttgcttcctctcatgggagcggttgggttggcaata
tgggttccttctgtagtaaaccaaccaaatgacaatgagccttctggttttagaacacca
agacgagggtattcttcagtttcatcagaagatagaaatggcagctcgaagcgagctgat
gttgcggatgacctcgaactcagtatcatacaaagtgatgttaataattatggaacttat
aatgaagaaatgcttctggatgatttgaaggtctcccaggccatgtcaaaactttatgtc
aaagtattgccatctgcaacagtaacagaagcttttaagctattgcatgataatcagcaa
aattgtgcccttgttgtggaccctgaagattaccttgaagggattattacattaggggat
attcggcgcatgggatttgaattacatgaggaaagcttcattgatggagactaccccaag
actgataactcatcctccatttcgtcacttgttacgcgaggttttcagtatcaggggagt
gaacgtggattgttaacatgctttccagatactgatttgaccactgcgaaaaatcttatg
gaggccagagggataaagcagctgcctgtagttaagcgtggtgttggccatagaactaca
ggaaagcgcaagccaattgcccttctacattatgattctattggttcctgcctgcggtta
gtcataagcttatatcctttctctcaatccttgcagttctttgttttattgaactga
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