Panicum virgatum (switchgrass): 120640146
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Entry
120640146 CDS
T07260
Name
(RefSeq) transmembrane 9 superfamily member 12-like isoform X1
KO
K17086
transmembrane 9 superfamily member 2/4
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120640146
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120640146
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Gene cluster
GFIT
Motif
Pfam:
EMP70
Motif
Other DBs
NCBI-GeneID:
120640146
NCBI-ProteinID:
XP_039771958
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Position
1K:49343608..49346789
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AA seq
749 aa
AA seq
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MKVTDTQLSTCVVKKHFYRGPYKLTSQVHKISPVKAREAVQGSATESSLGLRVGCCTVSC
LASALPTQTSASSSASPPTSPVPCQVIGKVCPELPIMVKGWVFSTLLVVFLVFAAPCEAF
YLPGSYMHTYRQGEEIGAKVNSLTSIETELPFSYYSLPYCRPRDGIKKSAENLGELLMGD
QIDNSPYRFRVNVNESLYLCTTIPLDEADVKLLKQRSHDLYQVNMILDNLPVRRFTEQNG
MIIQWTGYPVGYIPEGTSDVYIINHLKFKVLVHKYEGGKVKVVGTGEGMEVISETDSDAN
SGFEIVGFEVVPCSVKRDPKAMSKHKMYDKVDPVNCPVELEKSQLIKEKEQITFTYEVEF
VNSDIRWPSRWDAYLKMEGSKIHWFSIMNSLMVILFLAGIVFVIFLRTVRRDLTRYEELD
KEAQVQMNEELSGWKLVVGDVFREPTSSKLLCVMIGNGVQILGMAIVTIFFAAFGFMSPA
SRGMLLTGMIVLYMLLGIVAGYAAVRLWRTLKGTSEGWRSVSWSTACFFPGIVFIVLTVL
NFMLWTRNSTGALPISLFFGLLSLWFCVSVPLTLLGGFFGTRAEPIEFPVRTNQIPREIP
AKKYSWLFILGAGTLPFGTLFIELFFILSSIWLGRFYYVFGFLLVVLLLLVVVCAEVSVV
LTYMHLCAEDWRWWWKAFFASGTVALYVFLYSINYLVFDLRSLSGPVSAMLYIGYSFIVS
LAIMLATGTVGFLTSFSFVHYLFSSVKID
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcacagacacacagctcagtacctgcgtggtaaaaaagcacttttatcgtggc
ccatacaaactaacaagtcaagtccataaaatcagcccagttaaagctcgcgaagcagta
cagggtagcgcgacggaaagttcgttgggactccgagttggatgctgtactgtttcgtgc
ttggcgtcggcgctgcccacgcagacgagcgcctcctcgtcggcttcgccgccaacctct
ccggtgccgtgccaggttattggcaaagtttgtcctgaactgcctatcatggtgaaaggc
tgggtattctctactttgttagtggtgtttctagtgtttgctgcaccatgcgaggcattc
tacttgccaggtagttacatgcacacgtatcggcaaggtgaggaaataggggcaaaggtg
aactccctcacttccattgagacagaactgcccttcagctactacagcctcccatactgt
cgtcccagagatggcattaagaagagtgctgaaaacttgggggagcttctgatgggtgat
caaattgataattccccgtaccgtttccgtgtgaatgtcaatgaatctctgtatctgtgt
accacaatcccacttgatgaggctgatgtgaagctcctcaagcagcgaagccatgatctg
taccaggtgaacatgattcttgacaatcttcctgtgaggaggttcactgagcagaatgga
atgatcattcagtggacgggatatccagttggttatattccagaaggcaccagtgatgtc
tatatcatcaatcacctgaaatttaaggtattggtccataagtatgaaggaggcaaagta
aaggttgttgggactggggaaggaatggaagtgatctcagagacggacagtgatgccaac
tctggctttgagattgtgggatttgaggtggttccttgcagtgtgaagcgtgatcctaaa
gccatgtcgaagcataagatgtatgataaagtcgatcctgtaaactgccctgtggagttg
gagaaatctcaattgatcaaggagaaagagcagattacttttacatatgaggttgaattt
gtaaacagtgatatcagatggccatcacggtgggatgcctacctgaagatggagggttcg
aagattcactggttctcaatcatgaactcgttgatggtaattctgttcttggctggcatt
gtatttgtcatattcttgcggacggtgaggagggacctgactaggtatgaagagttggat
aaggaggcccaagttcagatgaatgaggagctctctggttggaagcttgtcgttggagat
gtcttcagagagccaacctcatcaaagctgctctgtgtcatgattggaaatggggttcag
attctaggcatggcaattgtcaccattttctttgctgcgtttggcttcatgtctcctgca
tcaagaggaatgctgttgacagggatgatagtcctttatatgttacttggaattgtggcc
ggatatgctgccgtcaggctctggaggactttaaaaggaacgtctgagggatggaggtct
gtctcctggtcaaccgcttgtttcttccctggcattgtcttcattgtcctcactgtgtta
aacttcatgctgtggacaagaaatagtactggagcccttcccatctcacttttcttcggt
cttttgtccttgtggttctgtgtctccgtgccacttacccttttaggtggtttctttggc
acaagggctgagccaatagaattccctgttcgaacaaatcagataccaagagaaatccct
gcaaagaagtactcatggctcttcatacttggtgctggaactctaccatttggaacactc
ttcatagagctgttcttcattctttctagtatttggctaggaaggttctattatgtgttc
ggcttcctccttgttgtgctccttttgctggttgtggtctgtgctgaggtatcagttgtt
cttacttacatgcatctctgtgcggaggactggaggtggtggtggaaagctttcttcgcc
tctggaacagtggccctttatgtgttcctttactctatcaactacttggtgtttgatctc
agaagcttgagtgggccagtttctgctatgctctacattggatactctttcatcgtctct
cttgccattatgctagctactggtaccgttgggttcctgacatcattctcttttgtccac
taccttttctcatcagtcaaaattgattga
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