Panicum virgatum (switchgrass): 120640216
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Entry
120640216 CDS
T07260
Name
(RefSeq) endochitinase A-like
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120640216
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
120640216
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_19
Motif
Other DBs
NCBI-GeneID:
120640216
NCBI-ProteinID:
XP_039772005
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All DBs
Position
7K:complement(37842294..37852832)
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AA seq
199 aa
AA seq
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MDPAVMLTYHSPVLQQRCYDGGCSGVASGERLGKHQCPPSLNGGSEAQGKREIAAFFAHV
THETGHFCYISEINKNNDYCDRGNRQWPCAAGKKYYGRGPLQISWNYNYGPAGRSIGFDG
LGNPDRIAQDRVISFKTALWFWMNNVHGVISQGFGATTRAINGALECNGKNPDQMNARVR
YYRQYCQQLGVDPGSNLTC
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggacccggcggtgatgcttacatatcactcgccggtgctgcagcagcggtgctacgac
ggcggctgcagcggcgtggcgagcggcgagcggctcggcaagcatcaatgcccaccaagt
ttgaacggcggttccgaggcccagggcaagcgcgagatcgccgccttcttcgcgcacgtc
acgcacgagacagggcatttctgctacatcagtgagatcaacaagaacaacgactactgc
gaccggggcaacaggcagtggccgtgcgcggcggggaagaagtactacgggcgcggcccg
ctgcagatctcgtggaactacaactacgggccggcggggaggagcatcggcttcgacggg
ctcgggaacccggacaggatcgcgcaggaccgcgtgatctcgttcaagacggcgctctgg
ttctggatgaacaacgtgcacggggtgatctcccaggggttcggcgccaccaccagggcc
atcaacggcgccctcgagtgcaacgggaagaaccccgaccagatgaatgcgcgcgtgcgc
tactacagacagtactgccagcagcttggcgtcgaccccgggagcaacctcacctgctag
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