Panicum virgatum (switchgrass): 120640343
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Entry
120640343 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 1-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120640343
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120640343
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GFIT
Motif
Pfam:
BTB
BACK_BPM_SPOP
MATH_2
BACK
MATH
Motif
Other DBs
NCBI-GeneID:
120640343
NCBI-ProteinID:
XP_039772115
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Position
7K:48099388..48103625
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AA seq
430 aa
AA seq
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MAGIPKPGEVDSANIRRSNVQQLSVEHQKILDGVQKKIGEDKEIQKIREEKEKEIQKLEE
EAMNQYISHFSIDRQGKVMTDDVFDASQFEFCPNTNYSLLDGRIGAGMSIESAPFSVGVY
NWIIEFYPDGHSMEDCCCCCMSAASSFVSICDGAVTVNAKYTLSLVDRDGRAAASWLWRR
RSATVTYGWPHPRSWGFKVFYLKPLLRFSGYLDDDRLKIRCELTVFTPPRTEYTTPAPAP
PPELPGHLERALRDGRGADVTFAVAGREFRAHRALLAARSPVFDAELLGPMAEKDSRRAV
RIEDMEPAVFEMLLHFIYTDSPPGSFEGYSTATAQDLLVAADLYGMERLKLMCAEKLCKS
IDVATVMAILALADQHHCQELKEACVAFMSAPKVLRVLVAPDEFKHLMASCAQLVSRGSL
EGASVQRELK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggccggtattcctaaacctggtgaagtagattctgccaatatccggaggtcgaatgtt
caacaactttcggtcgagcatcagaagattcttgatggcgtccagaagaagatcggagaa
gataaggagatccaaaaaattagagaagagaaggagaaagagatccagaagctggaagaa
gaagccatgaaccagtacatctcacacttctccatcgaccggcaagggaaggtcatgacg
gatgacgtcttcgacgcttcacagtttgagttctgccccaacaccaactactccctgctc
gacggccgcatcggcgccggcatgtccatcgagtccgcccccttctccgtcggcgtttac
aactggatcatcgagttctacccggacgggcattccatggaggactgctgctgctgctgc
atgagcgcggcgtcctcgttcgtgtccatctgcgacggagcagtgaccgtgaacgccaag
tacaccctgagcctcgtggacagggacggcagggcggcggcgtcgtggctctggcgccgc
cggtcggccacggtgacctacgggtggccgcacccgaggagctggggcttcaaggtcttc
tacctaaagccgctcctgcggttctcggggtacctcgacgacgaccgcctcaagatccgg
tgcgagctcaccgtcttcacgccgccgcgcacggagtacaccacgcccgcgccggccccg
ccgccggagctgccgggccacctcgagcgcgcgctcagggacgggaggggcgccgacgtg
acgttcgccgtggcggggagggagttccgcgcgcacagggccctgctcgccgcgcggtcc
cccgtcttcgacgccgagctcctcggccccatggcggagaaggactcccggcgcgccgtg
cggatcgaggacatggagccggcggtcttcgagatgctcctccacttcatctacacggac
tcgccgccgggcagcttcgagggctacagcaccgcgacggcgcaggatttgctggtcgct
gcggatctgtacgggatggagaggctcaagctgatgtgcgcggagaagctgtgcaagagc
attgatgtggcgaccgtcatggccatactggccttggcggaccagcaccattgccaagag
cttaaagaagcctgcgttgcgttcatgtcggcgccaaaagtgttgagagtccttgtggcg
ccagacgagttcaagcacctgatggcgagctgcgcccagctggtttcgaggggcagcctt
gaaggtgcatctgtccaaagagagttgaagtag
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