Panicum virgatum (switchgrass): 120640459
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Entry
120640459 CDS
T07260
Name
(RefSeq) transketolase, chloroplastic-like
KO
K00615
transketolase [EC:
2.2.1.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00030
Pentose phosphate pathway
pvir00710
Carbon fixation by Calvin cycle
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01230
Biosynthesis of amino acids
Module
pvir_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
pvir_M00007
Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
pvir_M00165
Reductive pentose phosphate cycle (Calvin cycle)
pvir_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
120640459
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
120640459
09109 Metabolism of terpenoids and polyketides
01051 Biosynthesis of ansamycins
120640459
Enzymes [BR:
pvir01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.1 transketolase
120640459
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Motif
Pfam:
Transketolase_N
Transket_pyr
MalQ_N
E1_dh
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
120640459
NCBI-ProteinID:
XP_039772233
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Position
7K:19911692..19914571
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AA seq
475 aa
AA seq
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MGCAPLGHVLFDEFLRFNPKNPAWFDRDRFVLSAGHGCMLQYALLHLAGYDGVTMDDLKS
FRQWRSRTPGHPENFETPGVEVTTGPLGQGFANAVGLALAEKHLAARFNKTDLKIVDHYT
YVILGDGCQMEGVSNEAASLAGHWGLGKLIAFYDDNHISIDGNTDIAFTEDVLARYEALG
WHTIWVKNGNMGYDDIRAAIKEAKGVKDKPTLIKVTTTIGFGSPNKANTYSVHGSALGSK
EVEETRSNLQWLHEPFHVPDEVKRHWSHHTDEGASLEAEWNAKFAEYEKKYHQEAAELKS
IMPGELPSGWDSALPNYTPESSPDATRNLSQQCLNSLAKVIPGFLGGSADLATSNMTLLK
MFGGFQRDTPEERNIRFGVREHGMGAICNGIAVHSPGLIPYCATFFVFTDYMRAAIRLSG
LSQSGVIFMMTHDSIGLGEDGPTHQPVEQLFSFRAMPNILMLRPADGNETSVAYK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggggtgcgcgccgctgggccacgtcctgttcgatgagttcctccgcttcaacccgaag
aaccccgcctggttcgaccgcgaccgcttcgtcctctccgccggccacgggtgcatgctc
cagtatgcgctgctccacctcgccgggtacgacggcgtcacgatggatgacctgaaatct
tttcgacagtggagaagcagaactcctgggcatccagagaatttcgaaacacctggagtt
gaagtcaccactggtcctctgggacagggtttcgcaaatgctgttggactagcacttgct
gagaaacatcttgccgctcgtttcaacaagactgatctgaaaatcgtggaccattacacg
tatgtaatccttggggatggttgccaaatggaaggtgtttcaaatgaagcagcctctctt
gctggtcattggggccttggaaaattgattgctttctatgatgataaccacatatcaatt
gacggcaatacagatattgcgttcactgaagatgtgcttgcccgttatgaggcgctaggg
tggcatacaatctgggtgaagaatggaaacatggggtatgatgacattcgtgctgcaatc
aaggaagcaaagggagttaaagataagccaactcttatcaaggtgacaaccacaattggt
tttggatctccaaacaaggcaaacacatatagcgttcatgggagtgctttaggatccaaa
gaagtagaggaaactagaagcaatcttcaatggcttcatgagcctttccatgttcctgat
gaggtgaagaggcactggagtcatcatactgatgaaggtgcttctcttgaagctgaatgg
aatgcaaagtttgcagaatatgaaaagaaatatcatcaggaggcagctgagttaaagagc
ataatgccaggggaactaccttcaggttgggacagcgctcttccaaactatactcctgaa
agctctcctgatgctactaggaacttatctcagcagtgcttgaattcacttgcgaaagta
atacctggatttcttggaggtagtgctgatcttgcaacatcgaatatgacattgcttaag
atgtttggtggcttccagagggatactcctgaagagagaaacattcgtttcggtgtgaga
gagcacgggatgggtgccatttgtaatggcattgcagttcacagccctggcctgatacca
tattgtgctacattctttgtgttcactgactacatgagagctgccatccgcctttctggt
ttaagtcaatctggggtgatattcatgatgactcatgactccattggccttggagaagat
gggccaacccatcagcctgttgagcagttattcagcttccgagcaatgcctaacatttta
atgcttcggcctgctgatggaaatgagacatctgtggcttacaagtga
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