Panicum virgatum (switchgrass): 120640496
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Entry
120640496 CDS
T07260
Name
(RefSeq) probable ribose-5-phosphate isomerase 2
KO
K01807
ribose 5-phosphate isomerase A [EC:
5.3.1.6
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00030
Pentose phosphate pathway
pvir00710
Carbon fixation by Calvin cycle
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01230
Biosynthesis of amino acids
Module
pvir_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
pvir_M00007
Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
pvir_M00165
Reductive pentose phosphate cycle (Calvin cycle)
pvir_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
120640496
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
120640496
Enzymes [BR:
pvir01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.6 ribose-5-phosphate isomerase
120640496
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GFIT
Motif
Pfam:
Rib_5-P_isom_A
DeoRC
Motif
Other DBs
NCBI-GeneID:
120640496
NCBI-ProteinID:
XP_039772292
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Position
7K:20877203..20878312
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AA seq
260 aa
AA seq
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MGSAAASPPPSGKLSQDELKRVAAHRAVEFVEPGMTLGLGTGSTAAHALDHLGDLLRAGA
LPGVAGVPTSLKTELHAARVGIPLLPLDAASGARIRLSIDGADEVDPDLNLVKGRGGSLL
REKMIEGAGERFVVIVDESKLVPRLGCTGAVPVEVIPFGAPHTLGLICKVFDGLPGFHAR
LRTVVDADLGSAPFVTDNGNYIVEMFFEDGIRGDLQDISDRLLRITGVVEHGMFLGMATT
VIVANKDGTVTALHRKSKLI
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcgccgccgcctcgccgccgccgtccgggaagctgtcgcaggacgagctcaag
cgcgtggcagcgcaccgcgcggtggagttcgtggagcccggcatgacgctgggcctcggc
acgggttccaccgcggcgcacgcgctggaccacctgggtgacctcctccgcgcgggcgcg
ctgccgggggtcgccggcgtgcccacctccctcaagacggagctccacgcggcccgcgtc
gggatcccgctactcccgctcgacgcggcctcgggcgcccggatccgcctctccatcgac
ggcgccgacgaggtcgacccggacctcaacctcgtcaagggccgcggcgggtcgctgctg
cgggagaagatgatcgagggcgccggggagcggttcgtcgtcatcgtcgacgagtccaag
ctcgtgcccaggctcgggtgcacgggcgccgtccccgtcgaggtcatccccttcggcgcg
ccccacacgctgggcctcatctgcaaggtgttcgacggattgccgggcttccacgccagg
ctcaggacggtcgtggacgccgacctgggttcggcgccgttcgtcaccgacaacggcaac
tacatcgtcgagatgttcttcgaggatggcatacgcggcgacctgcaagacatcagcgac
cgcctcctccggatcaccggcgtcgtcgagcacggcatgttcctcggcatggccaccacc
gtcatcgtcgccaacaaggacggcaccgtcaccgccctccacaggaagagtaagcttatt
taa
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