Panicum virgatum (switchgrass): 120640549
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Entry
120640549 CDS
T07260
Name
(RefSeq) importin beta-like SAD2 isoform X1
KO
K20223
importin-7
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120640549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120640549
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
120640549
Pre-60S particles
120640549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBN_N
TPR_IPO11
Cse1
HEAT_IPO9_c
Xpo1
TARBP1
Motif
Other DBs
NCBI-GeneID:
120640549
NCBI-ProteinID:
XP_039772353
LinkDB
All DBs
Position
7K:22480399..22498715
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AA seq
1027 aa
AA seq
DB search
MDLPSLVVVLRAALSHAPEERKAAEASLEQLQYTPQHLVRLLQIIVDGNCDMAVRQVASI
HFKNFVAKNWSPVDPEEKQKIPETDKSMVRENILGFVTQLPPLLRAQLGESIKTLIVVDY
PEQWPNLLHWVTHNLESQDQIFGALYVLRILARKYEFKSEEERIPLYQVVEESFPRLLNI
FSKLVQIPNPPIEVADLIKLICKIFWSSIYLEIPKQLFDPNVFNAWMVLFLNLLERPVPV
EGQPSDPDARKSWGWWKVKKWIAHILNRLYTRFADLKIQKPESKAFAQMFQKNYAGKILG
CHLQLLNAIRTGGYLPDRVINLILQYLTNSVTKNSMYQLMQPQMDIIMFEIIFPLLCFND
NDQMLWDEDPHEYVRKGYDIIEDLYSPRTAAMDFVNELVRKRGKGNLQKFIHFIVGIFMR
YDEASIELKPYRQKDGALLAIGTLYDRLKQTDPYKGELERMLVQHVFPEFSSHVGHLRAK
AAWVAGQYAHIKFSDKNNFRKAMHCVIAGMRDAELPVRVDSVFALRSFVEACTDLDEIRP
ILPQLLDEFFKLMSEVENEDLVFTLETIVDRFGEEMAPYALGLCQSLAAAFWRCMASSEA
DEEAEDTSALAAVGCLRAISTILESISSLPHLYIQIEHTLLPILRKMLTSDGQDVYEEVL
EIVSYMTFYSPSISLDMWSLWPLIMEALNDWAIDFFENILVPLDNYVSRGTEHFLTCKDP
DYQHSLWKALSSIMADQNMEDSDIVPAPKLIEVFFQNCKGQVDHWVEPYLRLTIDRLRRT
EKPYLKSLLLQAIANTLYYNPSLALQKLHTLGVATEIFNLWFVMLQQVKRSGQRANFKRE
YAKKVCCLGLTSLIGLPASHVPGEALERIFKSTLELLVAYKDQVAESKRQNEAAAEDLDG
FDADEEEEEVESDKEMGLDDEDGDGANNFNPESFAEVRGFHREDSEDDSDDEFSDDEELQ
TPIDEVDPFIFFVETIQALQASDPGRFQNLMQTLDFHYQALASGVAQHAEERKTEIAKEK
LEKTNAQ
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggatctgccgagcctggtggtcgtgctgcgcgcggcgctcagccacgcgcccgaggag
cgcaaggccgccgaggccagcctcgagcagcttcaatacactccacaacatttggtgaga
ttattgcaaatcattgtagatggaaactgtgacatggccgtgagacaggttgcaagtatc
catttcaagaactttgttgcgaaaaactggtcccctgttgatcctgaagaaaagcaaaaa
ataccagagactgacaaatccatggtccgtgagaatatactgggctttgtcacgcaactg
cctccactgctaagagcacagcttggagaaagtatcaagaccttgattgttgtggattac
cctgagcagtggcctaaccttctacattgggttacacataacctagaatcacaggaccaa
atttttggagctttgtatgtactaaggattcttgcccggaaatatgagttcaagtcagag
gaagaaagaatacctttgtatcaagttgttgaagaatctttccctcgtttgttgaatatc
ttcagcaaacttgtacagattccaaatcctccaattgaagtagctgacttgatcaagctg
atatgcaaaatattctggtcttcaatttatctagaaattcctaaacaactctttgatcca
aatgtcttcaatgcgtggatggttttgttcttgaatttgttggagaggccagttccagtg
gaaggacaaccatcagaccctgatgctagaaaatcttgggggtggtggaaagtcaagaaa
tggattgcccatatcttaaaccgtctatatactcggtttgctgatttgaagattcagaaa
cccgagagcaaagcttttgctcaaatgtttcaaaagaactatgctggaaaaattttggga
tgccacttacagttgctcaatgctatccgtacaggcggctatctacccgatagagttatc
aatcttattcttcaatatctcaccaacagtgttacaaagaacagcatgtatcaactgatg
cagccgcaaatggacatcattatgtttgagataatatttccactattgtgcttcaatgac
aatgatcaaatgttgtgggatgaagatcctcatgaatatgtccggaaaggctatgatatt
attgaagatttgtatagtcctcgaacagctgccatggactttgtgaatgaacttgtaaga
aaacggggaaagggcaacctgcaaaagtttatacattttattgtgggaatatttatgagg
tatgacgaggcatctattgaattgaagccatatcgccaaaaagatggtgcccttcttgcc
attgggacgttatatgataggttgaagcaaactgatccatataagggtgagctggagcgg
atgttggttcagcatgtatttccagagtttagtagtcatgttggacacttgcgagcaaag
gcagcatgggttgctggacagtatgcacacatcaagttctcagacaagaacaactttcgc
aaagctatgcattgtgttatagctggtatgcgtgatgctgaacttcctgtccgagttgat
tcagtgtttgccctccgttcttttgttgaagcatgcacagatctggatgagatccggccg
atacttcctcaacttctcgatgagttttttaagcttatgagtgaagttgagaatgaggac
cttgtcttcacccttgagacaattgtcgacagatttggtgaagagatggcaccatatgca
cttggcttatgccagagtctggccgctgcattctggagatgcatggctagttcagaagct
gatgaggaagccgaggatactagcgctttagctgctgttggttgcttacgtgccataagc
accatccttgagtccattagcagtcttcctcatctttatatccaaatagaacacaccctg
ttgcctatattgcgcaagatgttgacttcagatggtcaagatgtctatgaagaggttctg
gaaatagtctcctatatgacgttttactcaccatcaatttcattggacatgtggagcttg
tggccattgataatggaggcccttaatgattgggccatagatttcttcgagaatattctt
gtcccattagacaactatgtttcccggggcaccgaacattttcttacatgcaaagatcct
gactaccaacatagcttatggaaagcactatcatctattatggcagatcaaaacatggaa
gattctgatattgtacctgcaccgaagctcattgaagtgtttttccaaaactgcaaaggc
caagtagatcattgggttgagccgtatctcaggcttacaattgatcggttgcgtcgaacg
gagaagccatatctgaaaagtctccttttacaagcgatagctaacacgctgtactacaat
ccttcactagcacttcaaaagttacatacacttggagttgcaacagaaattttcaatctt
tggtttgtaatgttacaacaagtcaaaaggagcggccagcgagctaacttcaagagagag
tatgctaagaaagtctgctgcttaggattgacttcacttattggccttccagctagtcac
gttccaggagaagctctagaaaggattttcaaatcaacgctagagctgcttgtggcttac
aaggatcaagttgcagaatctaagaggcaaaatgaagctgctgctgaagatttggatggc
tttgacgctgatgaagaagaagaggaagttgagtctgataaggagatgggtcttgatgat
gaagatggtgatggagctaataatttcaaccctgagagttttgcggaggtgagaggtttc
caccgagaagattcagaagatgattctgatgatgaatttagcgatgatgaagagctacag
acaccaatagatgaggtggacccatttatattctttgtagaaactatccaggctttgcaa
gcatcagatccaggtaggttccagaaccttatgcagactttggatttccactaccaggcc
cttgctagtggtgtagctcagcatgccgaggaacgaaaaactgaaatcgcaaaagagaag
ttggagaagacaaatgcacagtga
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