Panicum virgatum (switchgrass): 120640594
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Entry
120640594 CDS
T07260
Name
(RefSeq) sister chromatid cohesion protein SCC4
KO
K11266
MAternally affected uncoordination
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120640594
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
120640594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cohesin_load
TPR_12
NRBF2_MIT
Motif
Other DBs
NCBI-GeneID:
120640594
NCBI-ProteinID:
XP_039772405
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Position
7K:24669776..24677696
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AA seq
735 aa
AA seq
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MSVAAVSASSASAEGFLALADEADRRRDFSAAASCLESALRPPHAVALLPLAEARARLRL
AALLLAPRGSSPAPRAGAPAAAKAHLERALLILSPLPSAPPRLKLLAHSHLAGAYAVLGA
VPSQKHVLHRALGLLASASASGLLQRGPALLWTCNFQAQLASALTVDGDAASALSALSAG
GTAAAELGSPQLELFFAASTLHVHLLCWEDSAAVENSVTRATQLWDALPAQQKEHWVGLF
FYIELLRTFYLLRVCDYKAASQRVDRLDTAAKSELQRGQHIKELANELRAVERTLGQPGL
KERERSALSHKQRQLKAQLRALCGYDSLADVLDYGDKLLLAPPPMHGEWLPRTAVFVLVD
LMVVMVSRPKGIFKECGKRINSGLQLILDELVKLGIVDGVTEVNLEPSTIWTAGLYLTLL
LQFLENKVAVELTRSEFVEAQEALAQMKNWFARFPTILQGCESTIEMLRGQYAHSVGCFD
EAAFHFLEAMKLTESKSMQSMCQVYAAVSYICKGDAESSSQALELVGPAYRTMDSFVGVR
EKTCIIFVYGLLLMRQHNPQEARNRLASGLRIAHQQLGNIQLVSQYLTMLGTLALQLHDA
GQAREILKSSLTLAKTLFDIPTQIWILSVFTELYRELEERGHEMENYEYERKKEDDLQRR
LSEAYSHVFHQELVEKSRIQIQPLHDMSRMQSEMAGPTANGDLDIPESVGLSAPQPSLKR
LVEQGSARRSTRRLQ
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcgccgccgtatccgcctcgtcggcgtccgcggagggcttcctcgcgctggcc
gacgaggccgatcgccgccgcgacttctcggccgcggcctcctgcctcgagtccgcgctc
cgcccgccccacgccgtcgcgctcctcccgctcgccgaggcccgcgcgcggctccgcctc
gccgcgctcctcctcgcgccccggggctcctccccagccccgcgcgccggcgcccccgcc
gccgccaaggcgcacctcgagcgcgcgctcctcatcctctcgccgctgccctccgcgccg
ccgcggctcaagctgctcgcccactcccacctcgccggcgcctacgccgtcctcggggcc
gtcccgtcgcagaagcacgtgctccaccgcgccctgggcctcctcgcctccgcctccgcc
tccggcctcctccagcgcgggcccgcgctgctgtggacctgcaatttccaggcgcagctc
gcgtccgcgctcaccgtcgacggggacgccgcgtcggcgctctccgccctctccgctggg
ggaaccgccgccgccgagctcgggagcccccagctggagctcttcttcgccgcctccacg
ctccacgtgcacctcctctgctgggaagacagcgccgcggtggagaactccgtcactcgc
gccacacagctctgggatgcgctcccggcccagcagaaggagcactgggttgggctcttc
ttctacattgagctgctgcggaccttctacctgctgagagtctgcgactacaaggctgcc
tcacagcgtgtagatcggctggacacagctgcgaagagcgagttgcagagaggccaacac
attaaggagcttgccaatgagctcagagcagtggagaggacgctggggcagcctggtttg
aaggagcgggagaggtcagcgctgtcacacaagcagaggcagctcaaggctcagttgcgg
gcgttgtgcggctatgattcattggctgatgtgctggattatggggataagttgcttttg
gcaccaccgccaatgcatggggagtggctcccgcggactgctgtgtttgtgctcgtagat
ctcatggtcgtcatggtgagtcgtccaaaaggaatatttaaggagtgtgggaagagaata
aattcaggactccagctcattcttgatgaacttgtgaagcttggcattgtggatggtgtg
acagaagtaaatttggaaccctcaacaatatggacagctgggctgtacttgacgctttta
cttcagtttctggaaaacaaagttgccgtggaactgacaagatcagaatttgttgaagcc
caggaggctttggcacagatgaaaaactggtttgctcgtttcccaacaatccttcaagga
tgtgaaagcaccattgaaatgttaaggggacaatatgcacattctgttggttgctttgat
gaggctgctttccatttccttgaagcaatgaagctgacagagagcaaatcaatgcaatcg
atgtgccaagtctatgcagcagtgtcatacatatgtaaaggtgacgcagaatcgtcttca
caggcactagaattagttggtcctgcttatagaacaatggactcttttgttggcgtccga
gagaagacctgtataatttttgtttatggacttctacttatgaggcagcataatccacaa
gaagcacggaatcgccttgcaagtggtttgagaatagcacaccaacagttgggtaacatc
caattggtttctcagtacctaacaatgctgggcacattggcgcttcagctacatgatgca
ggacaagctagagagatcctgaagtcatcattgaccttagctaagacgctatttgatatt
ccaacgcaaatttggatcttgtcagtatttacagagttatatcgagaattggaagagagg
gggcatgaaatggagaactatgagtatgaaaggaagaaagaagatgatcttcagagaagg
ctttctgaagcttattctcatgtttttcaccaggagctggtcgagaaatcaagaatccag
attcagccgctacatgacatgtcaaggatgcaatcggagatggctggccccacagccaat
ggtgaccttgacattcctgaatctgtagggctctccgctcctcagccttccctcaaaagg
cttgtggagcaaggttcagcaaggcgcagcacaaggcggctacagtag
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