Panicum virgatum (switchgrass): 120640664
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Entry
120640664 CDS
T07260
Name
(RefSeq) nuclear transport factor 2-like
KO
K24983
Ras GTPase-activating protein-binding protein 2
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120640664
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120640664
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
120640664
NCBI-ProteinID:
XP_039772502
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All DBs
Position
7K:complement(26549533..26556021)
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AA seq
498 aa
AA seq
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MASPPPPPPPPPAGAAAPGSPPPAQVVGNAFVNQYYNILHQSPELVHRFYQDASRLGRPA
GAGADGMDTVTTMDAISDKIVSMGITRAEIKAVDAQESLGGGVTVLVMGHLTGRTGVGRE
FVQSFFLAPQEKGYFVLNDILRYVGDGEGEEGAGHPPPPPQQPVQETVTGAEAVPAPILA
NGTVGGDNETLPCEQDASPQPEQPAAESATPTPEEEDLYGEEVYNPPNDMEKPVVQETPV
AEVINEVPNNVAVAAPSSSPSIPIEEAPKKSYASIVKVMKEYPPPAPAVPSRPAPPKPEK
QAPPAPSLVADAPAFSPNTQGGSFQDPEVDAHAIYVRNLPLNATPQQLEEEFKRFGTIKH
EGIQVRSNKIQGFCYGFVEFEDANAVQTAIEASPVMISERQCYVEEKRTTGSRGSNRGGR
FAPGRGGNFRGEGLRGRGTYNGGRGYGRGEFSYRSDYGGRGGGRGGSSRGEVGYQRVDHS
GTAGGRGTRPASAATAAK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgccgccgccgccgccgccgccgccgcccgccggagccgccgcgcccggatcg
ccgccgccggcgcaagtggtgggcaacgcgttcgtgaaccagtactacaacatcctgcac
cagtcgccggagctcgtccaccggttctaccaggacgccagccgcctcggccggcccgcc
ggcgccggcgccgacggcatggacaccgtcaccaccatggacgcgattagcgacaagatc
gtgtccatgggcatcacgcgcgcggagatcaaggcggtggacgcgcaggagtcgctcggc
ggcggcgtcaccgtgctcgtcatgggccacctcacggggaggaccggcgtcggccgcgag
ttcgtgcagtccttcttcctcgcgccgcaggagaagggctacttcgtgctcaacgacata
ctgcgctacgtcggggacggggaaggggaggagggagccgggcacccgccgccgccaccg
cagcagccggtgcaggagacagtcacgggcgcggaggccgtccctgctcccatcctggcc
aatggcactgtcgggggagacaacgagaccctgccttgcgaacaggatgcttcaccgcag
cctgagcagcctgcagctgagtccgcaactcctactccagaggaggaagatctctacgga
gaggaggtttacaacccgccgaatgatatggagaagcctgttgttcaggaaacaccggtt
gccgaggtcataaatgaagtgccgaataatgtagcagtggctgcgccaagttcgtctccc
tctataccgatcgaggaggccccaaagaagtcatatgcttcgattgtaaaagtcatgaaa
gaatatccaccaccagctcctgcagttccctccaggcctgcacccccaaaaccagagaaa
caagcccctcctgcaccttctctggttgctgatgctccagctttcagtcctaacactcag
ggtggcagctttcaagatccagaagttgatgcacatgccatatatgtgcggaatctgcct
ttaaacgccacaccacaacaattagaagaagaattcaagcgatttggcaccattaagcat
gaaggcatccaagttagaagcaacaagatccaagggttttgttatggctttgtagaattt
gaggatgccaacgcagtccaaactgcaatagaggcttctcctgttatgattagtgaacgg
caatgttatgttgaagagaaaagaactactggttctcgtggcagtaaccgaggaggaagg
tttgcaccaggtagaggtggtaacttccgaggtgaaggccttaggggccgtggtacttac
aatggaggcagaggctatgggaggggcgagttcagttaccgatctgattatggcggccga
ggtggtggcaggggtggctcatcgcgcggagaagttggctatcagcgggttgaccactct
ggtacagccggtggccgtggcacccggccagcatctgctgctactgctgcaaagtga
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