Panicum virgatum (switchgrass): 120640665
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Entry
120640665 CDS
T07260
Name
(RefSeq) nuclear transport factor 2-like
KO
K24983
Ras GTPase-activating protein-binding protein 2
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120640665
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120640665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
120640665
NCBI-ProteinID:
XP_039772504
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All DBs
Position
7K:complement(26543447..26548270)
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AA seq
490 aa
AA seq
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MASPPPPPAGAAAPGSPPPAQVVGNAFVNQYYNILHQSPELVHRFYQDASRLGRPAGAGA
DGMDTVTTMDAISDKIVSMGITRAEIKAVDAQESLGGGVTVLVMGHLTGRTGVGREFVQS
FFLAPQEKGYFVLNDILRYVGDGEGAEGAGHLPPAPEAAADAEAASAPVLANGTVGADNE
TVPREQDASLQPEQHAAEPAPPTQEVEDLNGEEVYNPPNDVEKPVVKETLVTEVINEVPN
NVAVAAPSSSPPVPIEEAPKKSYASIVKVMKEYRPPAPAVPSRPAPPKPEKQAPPAPTLV
ADAPAFTPNAQGGSFQDPEVDAHAIYVRNLPLSATPQQLEEEFKRFGTIKNEGIQVRSNK
IQGFCYGFIEFEDASAVQTAIEASPVMIGERQCYVEEKRTTGSRGGSRGGRFAPGRGGNF
RGEGLRGRGTYNGGRGYGRGELNYRSDYGGRGGGRGGSSRGDVGYQRVDHSGTVGGRGAR
ATSAATAAAK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgccgccgccgccgcccgccggagccgccgcgcccggatcgccgccgccggcg
caagtggtgggcaacgcgttcgtgaaccagtactacaacatcctgcaccagtcgccggag
ctcgtccaccgcttctaccaggacgccagccgcctcggccggcccgccggcgccggcgcc
gacggcatggacaccgtcaccaccatggacgcgattagcgacaagatcgtgtccatgggc
atcacgcgcgcggagatcaaggcggtggacgcgcaggagtcgctcggcggcggcgtcacc
gtgctcgtcatgggccacctcacggggaggaccggcgtcggccgcgagttcgtccagtcc
ttcttcctcgcgccgcaggagaagggctacttcgtgctcaacgacattctgcgctacgtc
ggggacggggagggggcggagggggccgggcacctgccgccggcgccggaggccgccgcg
gacgcggaggctgcctctgctcctgtcctggccaacggcactgtcggggcagacaacgag
accgtgcctcgcgaacaggatgcttcgctgcagcccgagcagcatgcagctgagcccgca
cctcctactcaggaggtggaagatctcaacggggaggaggtttacaacccgcctaatgat
gtggagaagcctgttgttaaagaaacgctggttaccgaggtcataaatgaagtcccgaat
aatgtagcagtggctgcgccgagttcgtctccccctgtaccgatcgaggaggccccaaag
aagtcatatgcttcaattgtaaaagtcatgaaagaatatcgacctccagctcctgcagtt
ccttccaggcctgcacccccaaaaccagagaaacaagcccctcctgcacccactttggtc
gctgatgctccagctttcactcctaacgctcagggtggcagctttcaagatccagaagtt
gatgcacatgccatatatgtgcggaatctgccattaagtgccacaccacaacaattagaa
gaagaattcaagcgatttggcactattaagaacgaaggcatccaagttagaagcaacaag
atccaagggttttgttatggctttatagagtttgaggatgccagtgctgtccaaactgca
atagaggcttctcctgtcatgattggtgaacggcaatgttatgttgaagagaaaagaact
actggttctcgtggcggtagcagaggaggaaggtttgcaccaggtagaggtggtaacttc
cgaggcgaaggccttagaggccgtggtacttacaatggaggcagaggctacggaaggggc
gagttaaattatcgatccgattatggcggccggggtggtggcaggggtggctcatcacgt
ggagatgttggctaccagcgggtcgaccactctggtaccgttggtggtcgtggtgcccgg
gcgacatccgctgctaccgcggctgcaaagtga
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