Panicum virgatum (switchgrass): 120640671
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Entry
120640671 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 16-like isoform X1
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120640671
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120640671
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Gene cluster
GFIT
Motif
Pfam:
MatE
Peptidase_C74
GNVR
Motif
Other DBs
NCBI-GeneID:
120640671
NCBI-ProteinID:
XP_039772508
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Position
7K:26606712..26616613
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AA seq
489 aa
AA seq
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MMPSMDEALLGNGVQKTGGVGENLVLPEVRKQLHLAGPLIAAWILQNIVQMISVMFVGHL
GELALSCASIATSFAGVTGFSLLSGMASSLDTLCGQAFGAKQYYLLGIYKQRAILVLTLV
SLVVAVIWSYTGQILLVFGQDPEIAAGAGSYIRWMIPALFVYGPLQCHVRFLQTQNIVLP
VMLSSGVTALSHLLVCWLLVYKIGLGNKGAALANAISYLTNVSILAIYVRFAPVCKNTWR
GFSKEAFHDIPSFLRLGVPSALMVCLEWWSFELLVLLSGLLPNPKLETSVLSISLNTGSL
AFMIPFGLSAVISTRVSNELGAGRPQAAHLATRVVMVLAIVVGILIGLAMILVRNLWGYA
YSTEEEVVKYISKMMPILALSFLFDCVQCVLSGVARGCGWQKIGACVNLGAYYLIGIPAA
FCFAFVYHLGTLARNNLRTRRPDAIASHNYFVQQLGARSFEGKGQNFQFIPTSRHDDMTR
TSHTIFVLK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgatgccaagcatggatgaagcccttcttggcaatggtgttcagaagaccggaggggtg
ggagagaacctggtgctgcctgaggtcagaaagcagctgcaccttgctgggccactcatt
gccgcatggatcctgcagaacatcgtccagatgatatctgtcatgtttgttggtcacctc
ggtgagcttgcactctcctgtgcctccatcgccacctcttttgcaggtgttactggcttc
agcttattgtctggcatggcaagcagcttggacacactgtgtgggcaagcctttggggca
aagcagtactatcttctcggtatctacaagcagagggccatccttgttctcactctggtg
agccttgtggttgctgttatctggtcgtacactggccagatccttctagtctttggtcag
gacccagagattgcagctggagcagggagctacatccgatggatgattccagcgctgttc
gtgtacgggccactgcagtgccatgtccgattcctacagacgcagaacatagtccttcca
gtgatgctgagctctggtgttacagcgcttagccatctgctagtgtgctggctgctggtg
tacaagattggtctgggaaacaagggtgctgccttggccaatgccatttcgtacctgacc
aacgtctccatcctggcaatctacgtcaggtttgcaccagtctgtaagaacacctggaga
gggttctcgaaggaggcttttcatgacatccccagcttcttgaggcttggtgttccatct
gcactgatggtttgcttggagtggtggtcatttgagctcctggtgcttctttctggactc
ctcccaaacccaaagcttgagacatcggttttgtcgatttccttaaacacaggctcttta
gcgtttatgatcccttttgggcttagtgcagtcataagcacccgtgtttcaaatgagctt
ggtgctggacgaccccaagctgcccatctggctacccgtgtggtcatggtgctggctatc
gtggttggcatattaattggactggctatgattttggtgcgcaatttatggggatatgca
tacagtacggaggaggaagtggtgaaatacatctccaaaatgatgccgatactggctctg
tcattcttgtttgattgcgtgcagtgtgttctttcaggtgttgctaggggttgtgggtgg
caaaagattggtgcttgtgttaatcttggtgcgtactaccttattggaattccagcagcc
ttctgtttcgccttcgtttaccatctagggactttggctaggaataatctgcgcactcgt
cgtccagatgctattgcttctcacaattactttgtgcagcaactgggagcaagaagcttt
gaaggcaaaggacagaattttcagttcatccctaccagtagacatgacgacatgacacgc
acaagccacacgatttttgttttgaagtaa
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