Panicum virgatum (switchgrass): 120640687
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Entry
120640687 CDS
T07260
Name
(RefSeq) ER lumen protein-retaining receptor
KO
K10949
ER lumen protein retaining receptor
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120640687
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
120640687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ER_lumen_recept
PQ-loop
Motif
Other DBs
NCBI-GeneID:
120640687
NCBI-ProteinID:
XP_039772523
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All DBs
Position
7K:complement(26823546..26827196)
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AA seq
215 aa
AA seq
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MNAFRLAGDMTHLISVLVLLLKIHTIKSCAGVSLKTQELYALVFATRYLDIFTDFVSLYN
TVMKLIFLGSSFSIVWYMRRHKLVQRSYDKDHDTFRHQFLVLPCLILALLIHEQFTFKEV
MWTFSIYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRSLYILNWIYRYFTEPHYVH
WITWISGFVQTLLYADFFYYYINSWKNNVNLTLPA
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccttcaggctcgccggcgacatgacgcacctcatcagcgtcctcgtcctcctg
ctcaagatccacaccatcaagtcctgcgccggcgtttccttgaagacacaagagttgtat
gctcttgttttcgccactcgctacttggacatattcacggacttcgtatccctgtacaat
acggtcatgaagctcattttcctgggtagctcattctcaattgtttggtatatgaggcgc
cacaagttggtccagagatcatatgacaaggatcatgacactttccgccatcagtttctt
gttctaccctgtcttatattggctttgctcatccacgagcagttcactttcaaggaggta
atgtggacgttttccatttatctggaggctgttgctattcttcctcaacttgtgctacta
cagcgtacaagaaacatcgacaatttaactgggcaatatgtatttttccttggcgcatac
cgatcgctctatattctcaactggatttaccgctacttcactgagccacactatgtacat
tggataacttggatatcaggatttgtgcagacattattgtatgcagatttcttctattat
tacatcaacagttggaagaacaacgttaatctcactctaccagcttga
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