Panicum virgatum (switchgrass): 120640803
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Entry
120640803 CDS
T07260
Name
(RefSeq) glycine--tRNA ligase, mitochondrial 1-like
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120640803
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120640803
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120640803
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120640803
Enzymes [BR:
pvir01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
120640803
Amino acid related enzymes [BR:
pvir01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
120640803
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120640803
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
120640803
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
120640803
NCBI-ProteinID:
XP_039772655
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All DBs
Position
7K:29254578..29260084
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AA seq
677 aa
AA seq
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MLLLRRRVRFLLPSSLSSPRAPLAKPLPLPLRHPPRILASAARPLASMAAPAAMSRDAFR
AAVTNTLERRLFFVSSFKIYSGVAGLYDYGPPGCAVKANVLAFWRQHFVLEEGMLEVDCP
CVTPEVVLKASGHVDKFTDLMVKDEKTGNCYRADHLLKDFCKDKLEKDQTLSPEQAEEYN
KILAILDDLSAEQLGAKIKEYGIVAPDTKNPLSDPYPFNLMFQTSIGPSGLSPGYMRPET
AQGIFVNFKDLYYYNGNKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPEDK
SHPKFGDVSDLEFFMFPREDQMAGKSATRLKLGNAVSEGTVNNETLGYFIGRVYLFLTQL
GIDKDRLRFRQHLPNEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAHSDKSGEKL
EAHEKFAEPREVEKLVITPSKKELGLAFKGNQRMVLEALEAMGETEALEMKAALESKGEV
EFKVCTLGKDVTIKKNMVSINIEKKKEHQRKFTPSVIEPSFGIGRIIYCLFEHCFYQRPG
KAEDEQLNVFGFTPLVAPIKCTVFPLVKLEKFEVVAKKISKALTAAGISHIIDMTGNTIG
KRYARTDELGVPLAITVDNTTSVTVRDRDSKDQIRVEVDEVASVVKEVTAGQSTWGDIMW
RYPAHTASAAEDEEAEP
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgctcctgctccgccgccgcgtccgcttcctcctcccgtcgtcgctctcgtcccctcgc
gcgccgctcgcaaaacctctcccgctccccctccgccacccgcccagaatactagcctcg
gcggcgcgcccgctcgcgtccatggccgcgccggcggcgatgagccgggacgcgttccgc
gcggcggtgaccaacacgctggagcggcgcctcttcttcgtgtcctccttcaagatctac
agcggcgtcgcggggctctacgactacggcccccccgggtgcgccgtcaaggccaacgtc
ctcgccttctggcgccagcattttgtgttagaggaagggatgcttgaggttgactgtcca
tgtgtgacaccagaagttgtcttgaaagcctctggtcatgtggataaatttacagactta
atggttaaagatgaaaagacaggcaactgctaccgtgcagatcatttgctcaaggatttt
tgtaaggataagcttgagaaggaccagacgttgtcacctgagcaggcagaagaatacaat
aaaattcttgctatcttggatgatctctctgcagagcaattgggtgctaagattaaggag
tatgggattgttgctcctgacaccaagaacccattgtcagatccctaccccttcaatctc
atgtttcagacttccattgggccgtcaggtttgagtccagggtatatgaggccagagaca
gcacagggtatctttgtgaactttaaagacttgtactactacaatggcaacaagctacct
ttcgctgcagctcaaattggccaggccttcaggaatgagatatctccccgccaaggcctt
ctgagagtccgtgagtttacattagcggaaattgagcactttgtggacccagaggacaaa
tcccaccccaaatttggtgatgtctctgacctagaattttttatgtttccaagagaggat
caaatggcaggaaagtcagccacaagacttaaacttggaaatgctgtatccgagggaact
gtgaacaatgagacccttggctactttattggaagggtctaccttttcttgacacaactt
gggattgataaagatcgtctacgcttccggcagcatctgccaaatgaaatggctcactat
gctgctgattgttgggatgcagagattgaatgctcttatggatggattgagtgtgttgga
attgctgataggtctgcctatgacttgcgtgcacactcggataaaagtggtgagaaactt
gaagcacatgaaaagtttgcagaacccagagaagtggagaaattagttataaccccatca
aagaaggagcttggtcttgcattcaaagggaaccaaaggatggttcttgaagcattggaa
gcaatgggtgagactgaagctttggagatgaaagctgcgttggagtccaagggggaggtt
gagtttaaggtgtgcacccttgggaaggatgttacgataaagaaaaacatggtttcaatt
aatattgagaagaaaaaagaacaccaaaggaaatttactccttccgtcattgaaccatca
tttgggattgggcgcattatatactgcctttttgagcactgtttctaccaaaggcctggc
aaggcagaggatgagcagttaaatgtgtttggtttcacccctcttgttgccccaataaag
tgcactgtctttccactggtcaagcttgagaaatttgaggttgttgcaaagaaaatttca
aaggccttgacagcagcagggatttcacatattattgacatgacaggtaacacaatagga
aaacgctacgcaaggacggacgagctgggcgtgcccctggcgatcacggttgacaacacc
acaagcgtgacggtgcgtgaccgggacagcaaggaccagatccgtgtggaggtggatgag
gtggcctcggtggtgaaggaggtgacggccgggcagagcacctggggcgacatcatgtgg
aggtacccggcgcacaccgcctccgccgccgaggatgaggaggccgaaccctga
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