Panicum virgatum (switchgrass): 120640804
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Entry
120640804 CDS
T07260
Name
(RefSeq) probable glucuronosyltransferase Os04g0398600
KO
K20870
putative beta-1,4-xylosyltransferase IRX10 [EC:2.4.2.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120640804
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120640804
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GFIT
Motif
Pfam:
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
120640804
NCBI-ProteinID:
XP_039772656
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Position
7K:29266802..29269446
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AA seq
428 aa
AA seq
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MGSGAGWLPVALLLLAASVLSPRVAAAAAAAGGEAEHAVQQHSERISGSAGDVLEDNPVG
RLKVFIYDLPRKYNKKMVTKDPRCLNHMFAAEIFMHRFLLSSAVRTLNPKEADWFYTPVY
TTCDLTNAGLPLPFKSPRVMRSAIQYISNKWPFWNRTDGADHFFVVPHDFAACFHYQEEK
AIERGILPLLRRATLVQTFGQENHVCLKEGSIIIPPYAPPQKMQAHLISPDTPRSIFVYF
RGLFYDTGNDPEGGYYARGARASLWENFKSNPLFDISTDHPATYYEDMQRAVFCLCPLGW
APWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGVFVEEKDVPKLDTILTSMPIDD
ILRKQRLLANPSMKQAMLFPHPAQPRDAFHQILNGLARKLPHPEGTYLQPGDRHLNWTAG
PVGDLKPW
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgggatcaggagcggggtggctccccgtggccctcctgctgctggccgcctccgtcctc
tcgccgcgggtcgccgcagccgccgccgccgccggcggcgaggccgagcatgccgttcag
cagcacagcgagcgcatctcagggagtgctggtgatgtgttagaagataatcctgtgggg
aggttgaaggttttcatttatgacttgccgaggaagtacaacaagaagatggtcaccaag
gatccacggtgcctcaatcacatgtttgctgcagaaattttcatgcatcgtttcttgctc
tcaagtgctgtgcggactctaaatcccaaggaggcggactggttctatacgccagtttat
actacttgtgatttaactaatgctggactgcccttgccatttaagtcaccacgggtgatg
aggagtgcaatccaatatatttcaaacaaatggcccttctggaacagaactgatggagca
gatcacttctttgttgttccgcatgattttgcagcatgcttccattaccaggaagaaaag
gctattgagcgtggaattcttccattgctgcgacgtgctactttggttcaaacttttgga
caggaaaatcatgtctgtctgaaggagggttctatcattatcccaccctatgctcctcca
cagaaaatgcaagctcatctgatttcccctgacactccacgctcaatctttgtttacttc
cggggacttttctatgatacagggaatgaccctgagggcgggtactatgccagaggtgca
cgagcttccctgtgggagaatttcaagagcaaccctctatttgatatttccacagatcac
cctgccacttactatgaagacatgcagcgtgctgtcttctgcctgtgcccattgggctgg
gcaccatggagccctagattggttgaggctgtggtctttggctgcattccagttatcata
gctgatgatattgtgctaccatttgcggatgcaattccatgggaggaaattggtgtcttt
gtcgaggagaaggatgtcccgaagttagacacaatcctcacatcaatgccaatcgatgac
attttaagaaagcaaaggttacttgcaaatccatcaatgaagcaggccatgttgttcccg
catccagcccaaccgagggatgcattccaccaaatcttgaacggtcttgctcgcaagctg
ccacaccctgagggaacatacttacaacctggcgataggcatctcaactggactgctgga
cctgtgggagatctgaagccctggtag
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