Panicum virgatum (switchgrass): 120640846
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Entry
120640846 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120640846 isoform X1
KO
K19042
E3 ubiquitin-protein ligase BOI and related proteins [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120640846
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120640846
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120640846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
FANCF
Motif
Other DBs
NCBI-GeneID:
120640846
NCBI-ProteinID:
XP_039772700
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All DBs
Position
7K:complement(30067427..30069962)
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AA seq
407 aa
AA seq
DB search
MAPYITSLPHSKACCLRVNQPTNQPIIHFAPPTRRPLPFASRWRHTWPCGRATSPTPPSS
PTTSTPSGNTSLLPGCLPSSIGCAIVVPGPVSDRARSARRAMEDAAAPAAGTAFFNECGW
SAPAAGIGSATVPASDFPRGEVACGYGFGPRKRPRVEAAAGFLEDRSAVLLPPTAAGAQE
LVPVTAAGNGQGRAAGSGAASTCGSVANGAGVSPSPGLLPRLRRHQDAELDALVTLESER
MRAALEEARRRHAQALLAAVERAASGRLRAAQAELARALLRNAELEEEARQAGAECQAWA
GAARSHEAVAAGLRGALEQLLQSPRAAAAASVGEAEDARSCCFEAPPPAASRREKAAPWC
RSCGGGEARVLLLPCRHLCLCRACEAGVDACPVCAAAKNASLHVLLS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggccccatatataacctctctccctcactccaaggcctgctgccttcgtgtaaaccaa
ccaaccaaccaacccatcatccacttcgcgcctcctacccgacgcccacttcccttcgct
tcgcgctggcgccatacatggccgtgcgggcgcgccacctctcccacgcctccttcttcc
cccacgacctccactccttcaggtaacactagtctcttgcccggttgccttccttcctcg
atcggctgcgcgatcgttgtcccgggaccagtctctgatcgtgcacgctccgcccgcagg
gctatggaggacgcggcagcgccggcggccggcacggcgttcttcaacgagtgcggctgg
agcgcgccggcggcagggatcggcagcgcgactgtgcccgccagcgacttcccgcgcggc
gaggtggcgtgcggctacggcttcgggccgaggaaacggccgcgcgtggaggcggcggcg
ggtttcttggaggatcgcagcgcggtcctcctgcccccgacggcggcgggggcgcaggag
cttgtgccggtgacagcagcgggcaacgggcagggaagggcggcgggctccggcgcggcg
tccacgtgcgggagcgtggccaatggcgccggcgtctcgccgtcgccgggactcctgccg
aggctgcgccgccaccaggacgccgagctcgacgcgctcgtaacactcgagagcgagagg
atgcgcgcggcgctggaggaggcccggcgcaggcacgcccaggcgctgctggcggccgtg
gagcgcgccgcgtcggggcggctgcgcgcggcgcaggcggagctggcgcgcgcgctcctc
cgcaacgcggagctggaggaggaggcccggcaggcgggggccgagtgccaggcgtgggcg
ggcgccgcccggagccacgaggccgtcgccgccggcctccgcggcgcgctggagcagctc
ctccagtccccccgcgcggccgcggccgcgtccgtgggcgaggccgaggacgcgcggtcg
tgctgcttcgaggcgccgccaccggccgcgtccaggcgcgagaaagcggcgccgtggtgc
aggtcgtgcggcggcggcgaggcgcgcgtgctgctgctcccgtgccggcacctgtgcctg
tgccgggcgtgcgaggccggggtggacgcgtgccccgtctgcgccgccgccaagaacgcc
tcgctccatgtcctgctgtcgtga
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