Panicum virgatum (switchgrass): 120640848
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Entry
120640848 CDS
T07260
Name
(RefSeq) probable BOI-related E3 ubiquitin-protein ligase 3
KO
K19042
E3 ubiquitin-protein ligase BOI and related proteins [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120640848
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120640848
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120640848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
120640848
NCBI-ProteinID:
XP_039772702
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All DBs
Position
7K:complement(30145775..30147477)
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AA seq
315 aa
AA seq
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MAVQARHLSHDFPPVGGSLFLDEYAAGCVPPTAPAGIADTMVLSGFSGSVLTSNHGFAPR
KRARVADAGGFLDLEDRRVVLPPAGMQGLAPLPVPGATGDDTRSRAAGSGAASTSCSAVA
HGGGATLSLCHQGGEIDALIRLESERMRVALEEARRRHARALLAAAGRAAVGRARAAEAE
LERALRRNAELEEKARQMGAECQAWMGVARSHEAVAAGLRATLDQVLLRPPTSGAAGDGG
GAEDARSCCFEGPPAPAAGDGASSPPSCRSCGGGEARVLLLPCRHLCLCRTCEAGADACP
VCAAAKNASLLVLVS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgcaggcgcgacacctctcccacgacttcccgccggtgggtggctccctgttc
ctggacgagtacgccgccgggtgcgtgccaccaacggcgccggcggggatcgcggacacg
atggtgctcagcggcttctccggcagcgtgctcaccagcaaccacggcttcgcgccgagg
aagcgggcgcgcgtggctgacgcggggggtttcttggacttggaggatcggcgcgtggtt
ctgcccccggcggggatgcaggggctggcgccgctgccggtgccaggggcgaccggagac
gacactcggagcagggcggcgggctccggcgcggcgtccaccagctgcagtgcggtggcc
catggcggtggcgcaaccctctcgctctgccaccagggcggggagatcgacgcgctcata
cggctcgagagcgagcggatgcgggtggcgctggaagaggcgcggcggaggcatgcccgg
gcgctgctggccgccgcggggcgggcggcggtggggcgcgcgcgcgcggcggaggccgag
ctggagcgcgcgctccggcgcaacgcggagctggaggagaaggcccggcagatgggcgcc
gagtgccaggcgtggatgggcgtcgccaggagccacgaggccgtcgccgcgggcctccgc
gccacgctcgaccaggtcctcctgcggccgcccaccagcggcgccgcgggcgacggtggc
ggggccgaggacgcgcggtcgtgctgcttcgaggggccgccggcgccggccgcgggcgac
ggcgcttcttcgccaccgtcgtgcaggtcctgcggcggcggcgaggcgcgcgtgctgctg
ctcccgtgccggcacctgtgcctgtgccgcacgtgcgaggccggcgcggacgcgtgcccc
gtctgcgcggcggccaagaacgcctcgctccttgtcctggtctcctga
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