Panicum virgatum (switchgrass): 120640926
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Entry
120640926 CDS
T07260
Name
(RefSeq) endoglucanase 6-like
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120640926
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
120640926
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_9
Motif
Other DBs
NCBI-GeneID:
120640926
NCBI-ProteinID:
XP_039772801
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Position
1K:50115710..50119500
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AA seq
501 aa
AA seq
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MPAAARSVKELAAAGVVLAMLLSAAAAQHDYGDALHKCILFFEGQRSGRLPPDQRVRWRR
DSGLHDGAAAGVDLTGGYYDAGDNVKFGFPMAFTATLMSWGLIDFGRSFGPNREEARKAV
RWATDYLMKATARPNTVYVQVGDAFRDHACWERPEDMDTPRTVYKVDPSHPGSDVAAETA
AALAAASIVFRDSDPGYSKRLLDRAVAVFEFADKHRGPYSSSLHAAVCPCYCDYSGYQDE
LLWGAAWLHKASRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDE
YFQSFRVNADNFMCTLLPGISNHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLS
HAGGRVSCGSSSASPAQLRHVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPS
VAAHPARIGCKAGAAYYASPAPNPNLLVGAVVGGPSDASDAFPDARAVFQQSEPTTYINA
PLMGLLAYFSAHPNPADSGGD
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgccggcggcggcgcggagtgtgaaggagctggcggcggccggggttgtcctggcaatg
ctgctctcggcggcggcggcgcagcacgactacggcgacgccctgcacaagtgcatcctc
ttcttcgagggccagcgctccgggaggctcccgccggaccagcgcgtccgctggcgccgc
gactccgggctccacgacggcgccgccgccggggtggacctgaccggagggtactacgac
gccggcgacaacgtcaagttcgggttcccgatggcgttcacggcgacgctcatgtcgtgg
gggctcatcgacttcgggcgcagcttcgggcctaacagggaggaggcccggaaggcggtg
cggtgggcgacggactacctgatgaaggcgacggcgaggcccaacacggtgtacgtgcag
gtgggcgacgccttccgcgaccacgcgtgctgggagcggcccgaggacatggacaccccg
cgcaccgtctacaaggtggacccctcccacccgggctccgacgtcgccgccgagaccgcc
gccgcgctcgccgccgcctccatcgtcttccgcgactccgaccccggctactccaagcgc
ctcctcgaccgcgccgtcgccgtgttcgagttcgcggacaagcaccggggcccctacagc
agcagcctccacgcggcggtgtgcccctgctactgcgactactccgggtaccaggacgag
ctgctgtggggcgcggcgtggctgcacaaggcgtcgcgccgccgcgagtaccgcgagtac
atcaagcgcaacgaggtggtgctcggcgccagcgacgccatcaacgagttcggctgggac
aacaagcacgccggcatcaacgtcctcatctcaaaggaggttctgatggggaaggacgag
tacttccagtcgttccgcgtcaacgccgacaacttcatgtgcaccctcctccctggcatc
tccaatcacccccagatccagtactctccaggcgggctgctgttcaaggtggggagcagc
aacatgcagcacgtgacgcagctgtcgttcctgctgctggcctactccaactacctgagc
cacgccggcgggcgggtctcgtgcggctcgtcgtcggcgtcgccggcgcagctccggcac
gtggcgaagcggcaggtggactacatcctgggcgacaacccgctgcggatgtcctacatg
gtcgggtacggcgcccggttcccgcggcggatccaccaccgcgccagctcgctgccgtcg
gtggcggcgcacccggcgcggatcggctgcaaggccggcgccgcctactacgccagcccg
gcgcccaacccgaacctgctcgtcggcgccgtcgtcggcgggcccagcgacgcctctgac
gccttcccggacgcgcgcgccgtgttccagcagtcggagcccaccacgtacatcaacgcg
ccgctcatgggcctcctcgcctacttctcggcccaccccaacccggccgactccggcggc
gactga
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