Panicum virgatum (switchgrass): 120640930
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Entry
120640930 CDS
T07260
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 6-like
KO
K12655
OTU domain-containing protein 5 [EC:
3.4.19.12
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120640930
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120640930
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120640930
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C85
120640930
Ubiquitin system [BR:
pvir04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
120640930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
UBA
UBA_9
Motif
Other DBs
NCBI-GeneID:
120640930
NCBI-ProteinID:
XP_039772802
LinkDB
All DBs
Position
7K:31174589..31179126
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AA seq
544 aa
AA seq
DB search
MTRIFVQRGAAGSSSSSGRAGSQPAQQQQPAAPAREEELLQQPQPQQPPELLASDDIAEH
LNEGSENSSSSINKPLRLDDPVSESSSSAEERAAREKPPKDDSNVINSTFLVEELIGLQI
PDEIEHENSVPSGTGSSQMAGAASHPPPPPAPPPKPSSRNNGLRRMGSGSSNSVRIGSSR
RPVAWPPVAARTSTSGSRPSSPRSLVDGEGYNSADEQGPCYASSYDDSERDRMFEHDLRR
VKGLEIRKMAEDGNCLFRAVADQVYGDAEAYDMARQMCVDYMERERDHFSQFITESFTLY
CKRKRRDKVYGNNVEIQAFAEMYNRPIHIYSYSTEPINIFQGSYNTDVPPIRLSYHHGNH
YNSVVDPRRQTVGAGLGFSSLRGTNNVDRDQVKAAIRAQQDQQIENALLAEGRFYSDLEL
TEREIERMVMEASRAEYLAEEKKLNIRESSTSGAEPSSSAAISGSSRSATAVDRGSDECF
VLPDTVLTRSMQLLLAMGFSYIQVMEAYSIFGEDVDSMICYLVETGGPGASAGSSNRRKG
KAAE
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgacgaggatcttcgtgcagcgcggggccgccggctcctcgtccagctccggccgcgcg
ggctcgcagccagcgcagcagcagcagccggcagctcctgcccgggaggaggagctgctg
cagcagcctcagccgcagcagccgccggagcttttggcctcagatgatatagccgagcat
ctaaatgagggcagcgagaacagcagcagcagcatcaataagcctttgaggctggatgac
cccgtttcggagagctcgagctcggcggaggagagggctgcaagggagaaacctcctaag
gatgactctaatgttatcaactccactttcttggtggaggaactgatagggctccagatt
cctgatgagatcgagcatgagaattctgtgccatcaggcactggttcatcacagatggcg
ggtgcagcatcacacccaccgccaccgccagctccacctccaaaaccatcatctaggaat
aatgggttgcggagaatggggtctggaagttcaaacagtgtgcggattggatcttcaaga
aggccagtagcttggccaccagtggcagcccggacatctacttcaggttctcgcccttct
tcgcctaggtcactggttgatggtgaaggatacaacagtgcagatgaacagggtccctgt
tacgcctcgagttatgatgattcggaaagggaccgcatgtttgagcatgacctaaggcgg
gtgaaagggttggaaatcagaaagatggcggaagacggtaactgtctattcagagcagtt
gctgatcaagtttatggagatgcggaagcttatgatatggctaggcagatgtgtgttgat
tatatggaaagggaacgggatcatttctctcagttcattactgaaagttttacattatac
tgtaagaggaaaaggagagataaggtatatggcaacaatgttgagatccaggcatttgca
gagatgtacaatcgccccattcacatatattcctacagtacagagcccattaacattttc
caaggaagctataacacagacgttcctccgattaggttaagttaccatcatggtaatcat
tataattcagtggttgatccccgtcgacagacagttggggcaggccttggatttagctcc
ctcagagggaccaataatgttgacagggaccaggtgaaggctgctataagggctcagcaa
gatcagcagattgagaatgcacttttggccgaagggagattctactctgatttggagttg
acagaaagggaaatagaacggatggtgatggaggcctcaagggcagagtatctggctgag
gagaaaaagcttaacatcagagaatcatcaacatcaggggcagaaccatcatcttctgct
gcaattagcgggtcgtctcgttcggctacagcagtagatagagggagtgatgaatgcttt
gtgctcccagacaccgtgctgactcgcagcatgcagctgctcctggcaatgggcttcagt
tacatccaggtcatggaggcctacagcatattcggcgaggatgtggactcgatgatctgc
tacctggtggagaccggaggccctggagcctccgcaggcagtagcaaccgccgtaaagga
aaggctgctgagtga
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