Panicum virgatum (switchgrass): 120640943
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Entry
120640943 CDS
T07260
Name
(RefSeq) transcription factor E2FA-like isoform X1
KO
K06620
transcription factor E2F3
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120640943
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
120640943
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GFIT
Motif
Pfam:
E2F_CC-MB
WHD_E2F_TDP
TrmB
Plectin_PPL
TMF_DNA_bd
Prefoldin_2
Motif
Other DBs
NCBI-GeneID:
120640943
NCBI-ProteinID:
XP_039772814
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Position
7K:complement(31312382..31315685)
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AA seq
382 aa
AA seq
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MTNPDFIGGVGSPVRAPVSGKSARTYKSKAKCSKPVPQTPISNATSSGNPPTPAGPCRYD
SSLALLTTKFVNLLKQAQDGILDLNSTADKLDVQKRRIYDITNVLEGIGLIEKKLRNIIC
WKGLDESGTNLDNDLSFLKNEVENLNLQEQALDEQISKMHKELKALTEDESRQRWLFLTE
DDIKGLPCFQNQTLIAIKAPHWSSVEVPNPDVMTSESFRRRYRIIIRSTMGPIDLYLVSN
FEMKSEEKLDDTTTLASHTHLAKRASSVKGPRTKRAGQSRSKEVMVNAQQIHKNPDLNAS
YPFEGVLRKITPSDVDSDADYWLLTDDDVSITDMWRTTPEMQWDQIDPHDFLAEEVSTPG
PGTLSQQPAAIGEPTAEGPNHG
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatcctgacttcattggaggagttggcagtccagttagggccccagtatctgga
aaatctgcaaggacatacaagtcgaaggctaaatgcagcaaacctgtacctcagacacct
atatcaaatgctacttcatctggcaatccacctactccggctggtccttgccgctatgac
agttcattagcactattgaccacaaagttcgtcaatctgctcaagcaggctcaagatgga
attttagatttgaacagcactgcagataagttagatgttcaaaaaaggcgcatttatgac
attacaaatgtccttgagggaattggtttgatagaaaagaagttgaggaacataatctgt
tggaagggtttggatgaatcaggaactaatttggataatgatctttcatttctgaagaat
gaagttgaaaatcttaatctccaggagcaggcattagatgaacaaataagtaaaatgcac
aaggaactgaaggcgttaactgaagatgaaagcaggcagaggtggctatttcttaccgaa
gatgacatcaagggattaccctgctttcagaaccaaacactaattgcaataaaagcacct
cattggtcttctgtggaagtacccaatcctgatgtgatgactagtgagagctttcgaagg
agatatagaataattatacggagtacaatgggcccaattgatctctacttggttagtaac
tttgagatgaaatcggaggaaaagctggatgacactacaacactggcaagtcacacacat
ttggcaaaacgtgcctcctccgtgaaaggccccagaacaaaaagagctggacaaagccgt
agcaaggaggtgatggttaatgctcagcagatccataaaaatccagatctaaatgcttca
tatccttttgaaggagtgttgaggaagattacaccttcagatgttgatagtgatgccgac
tactggctgcttacagatgatgatgttagcataactgatatgtggagaacaacaccagaa
atgcagtgggaccagatagacccccatgatttcttagctgaagaggtgagcaccccaggc
cccgggacactcagtcagcagccagctgcaattggtgaacctacagctgagggcccgaac
catgggtaa
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