Panicum virgatum (switchgrass): 120640968
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Entry
120640968 CDS
T07260
Name
(RefSeq) exocyst complex component SEC5B-like
KO
K17637
exocyst complex component 2
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120640968
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Tethering complex
Exocyst complex
120640968
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec5
Dor1
VPS51_Exo84_N
COG2_N
DUF6825
GlutR_dimer
Motif
Other DBs
NCBI-GeneID:
120640968
NCBI-ProteinID:
XP_039772845
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Position
7K:31765206..31776244
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AA seq
1104 aa
AA seq
DB search
MASDSDVDEDELLQMALQEQAARDLSHQRPPAANKPVVNLVRPHAPNARGGGNARAGAAP
AKARQPSRGGDEDEDSEVELLSISSGDEDDNPRARGPPPPRGGAGGRAGARRAASRDDGD
DDEEEPRSWKRVDEAELARKVREMREAKVAPSIQALDQKAAAAAAAAARKALTSVQTLPK
GVEVLDPLGLGVMDNKSLRLITDASVSSPISREKSQGLDPNLRDKVIYSSPNFDPKVFLS
WVHKDTSAADLESGALTLKTDLKGRTQQKKQLVKENFDCFVSCKTTIDDIESKLRQIEED
PEGAGTSHLHSVTQKISGVANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSAIRGN
IRKGEYDLAVREYQKAKSIVLPSHVGILKRVLEEVEKVMQEFRGMLYKSMEDPHLDLAEL
ENIVRLLLELEPETDPVWHYLNIQNSRIHGLFEKCTQDHEARMEILQNKIRDKVLSDSKW
RQLQQDSNKSLEVDSTIGDSPRTDQLSTNVMAEEADGLRSSYIRRLTSVLIQHVPAFWRL
ALSVFSGKFAKAATGTVVSDANMNAKPVANKTDEKGGEAKYTNHTLDEVASMVRATVSAF
DTKVQNTFRDFEECNILSPYMSDTIKEIAKACQTLEGKDSSPTAVKMLRALHFEMTKLYI
LRLCSWMRSTTKEISKDETWVTLSTLERNKSPYAISCMPLEFREITISAMDWIDTMILNL
MSETAKSYDISQPLQEINESVRLAFLNSFLDFAGYLERFGGELAQNRSNKENNYVQNGYI
NGTRETSTTVDGDLHKKLLVILSNIGYCKVELSDELYTRYRHIWSPVRNNDERNSDMRDL
MSSFSALEEKVLDQYTFAKSNLIRSAAQSYLLDSGINWGAAPSVKGIRDATLDLLHILVA
VHAEVYSGARPLLEKTMKILVEGLVDIFLSVFHENKTKDIRLLDANGFCQLMLELEYFET
VLHAYFSSEAQQALKSFQENLLEKACESLAEALENPGHQRRPTRGSEDAASDGQASVSPD
DLLALAQQYSSDLLQAELERTRLNIACFMESTLQLSSAPAGSKSAAYSSHHAPAPQHAPV
QTSSPSFRRQQTGSSSPVVSRRRR
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgacagcgacgtcgacgaagacgagctcctccagatggcgctgcaggagcag
gcggcgcgggacctcagccaccagcgcccgcccgccgccaacaaacccgtcgtcaacctc
gtccgcccgcacgcccccaacgcgcgcggcgggggcaacgcccgcgcgggggccgccccc
gcgaaggcgcgccagcccagccgcggcggcgacgaggacgaggactccgaggtcgagctg
ctctccatctcctccggcgacgaggacgacaacccccgggcccgcgggcccccgccgccc
cgagggggcgccggcgggcgcgccggggcgcggagggccgcgtcgcgggacgacggggac
gacgacgaggaggagcccaggagctggaagcgcgtcgacgaggcagagcttgctcgcaag
gttcgagaaatgcgtgaagcaaaagtagcgcctagtattcaagcacttgatcagaaagca
gcagcagctgctgctgcagcagcccggaaggccctcacaagtgtacagaccctaccaaaa
ggagtagaggttttggatccattgggccttggtgtcatggataataaatccctgcgattg
atcactgatgcctcagtaagttctccgatttcaagggagaagtctcaaggtttggacccc
aatctgcgagacaaagttatatattcgtctccaaattttgatccaaaggttttcctttcg
tgggtccataaagacacaagtgctgctgacttagagtctggtgctctcaccttgaaaact
gatctcaaagggagaacgcagcagaaaaaacagttagtcaaggagaactttgattgtttt
gtctcgtgcaaaactacaatagatgacattgagtcgaaattgagacagatagaggaagat
cctgaaggtgcaggtacttctcatttgcattcagtcacacaaaaaattagcggcgtggca
aatcgtgcatttgagcctctatttgagaggcaggcacaagctgagaagatcagatctgtc
cagggaatgcttcaaagattccgaacattatttaacctaccaagtgcaatccgtgggaac
attagaaaaggagaatatgatcttgctgtcagagagtaccaaaaagcaaagtcaattgtt
cttccttcccatgtggggatactaaaacgtgtacttgaggaagtggaaaaggtgatgcaa
gaattcaggggcatgctgtataaatcaatggaggatcctcatcttgaccttgctgagctt
gagaacattgttcgtctactgttggagttggaacctgaaacagatccagtgtggcactat
ctaaatattcagaatagtaggatccatggattgtttgaaaaatgtactcaagatcatgaa
gcaagaatggagattttgcaaaataaaattcgtgacaaagtgctatctgattcaaagtgg
aggcagctgcaacaagattcaaataaatctttggaagttgattccaccatcggtgattct
ccccgaactgatcagttgtcaacaaatgttatggctgaagaagctgacggtttaaggtct
agctacattcgtaggctaacttctgtacttatccagcatgttccagctttctggagatta
gctttatctgtcttcagtggaaaatttgccaaggcagctactgggactgtagtttctgat
gctaacatgaatgcgaagccagtcgcaaataagactgatgagaaaggtggagaagcaaaa
tacacgaaccatactcttgatgaagttgctagtatggttcgggctactgtgtcagctttt
gacaccaaggttcagaataccttccgtgattttgaggaatgcaacattctttctccatac
atgagtgacactataaaagaaatagctaaggcctgtcagacccttgaaggaaaggattcg
tctccaactgctgttaaaatgttgcgcgcccttcattttgaaatgacaaagctttacatt
ctgcggctttgttcatggatgcggtcaacaactaaggagatatcaaaagatgagacttgg
gttactttatccacccttgagagaaacaagtctccatatgcaatttcatgcatgccattg
gaattccgtgagatcacaatttcagcgatggactggattgatactatgattcttaatctg
atgagtgagactgcgaaatcatatgacatttctcaaccacttcaggaaattaatgagtct
gtcagacttgcattcttaaattcctttctggattttgctggttacctagagaggtttgga
ggggagctagctcagaacagatcaaacaaagaaaacaattatgtccaaaatggttacata
aatggtactagagaaacatccactaccgtagatggggatttgcacaagaagctactggtt
attttgagtaacattgggtattgcaaagtcgaactttccgatgaactgtataccagatat
agacatatttggtctccagtcaggaataatgatgaacgaaactctgacatgcgagatctg
atgtcatccttctctgcacttgaagagaaagtcctggaccagtatacttttgctaagtca
aacttgatcagaagtgccgcacagagttatcttttggattctgggattaactggggagca
gcaccgtcagtaaagggcattcgggatgcaactcttgatttactacacatccttgtagca
gtacatgcagaggtatactctggtgctcggcctttgttggagaagacgatgaaaattttg
gtggagggtttggttgacatttttcttagcgttttccatgagaacaagacaaaagatatt
agactattagatgcaaacggtttttgtcagctcatgcttgagcttgagtactttgagaca
gtactgcacgcatacttttcatctgaggcacagcaggctctgaaatcctttcaagagaac
ttgttggaaaaggcctgtgaaagtctggcagaagctttggagaatcctgggcaccaacgt
cgaccaactcgtggtagtgaagatgctgcctcagatggacaagcatcagtttcacctgat
gatttgcttgcgcttgctcaacagtacagtagtgatctgctgcaagcggagctggagaga
acccggttaaatatagcatgcttcatggagtcgactctccaattatcatctgcaccggca
ggctcaaagtctgctgcttattcttctcaccatgcaccagcgccacagcacgccccggtt
caaacctcctcgcccagttttagacggcagcagacaggttcaagttctcctgtagtctcc
aggcggcgacggtga
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integrated database retrieval system
