Panicum virgatum (switchgrass): 120641001
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Entry
120641001 CDS
T07260
Name
(RefSeq) glutamine synthetase cytosolic isozyme 1-1
KO
K01915
glutamine synthetase [EC:
6.3.1.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00220
Arginine biosynthesis
pvir00250
Alanine, aspartate and glutamate metabolism
pvir00630
Glyoxylate and dicarboxylate metabolism
pvir00910
Nitrogen metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01230
Biosynthesis of amino acids
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
120641001
09102 Energy metabolism
00910 Nitrogen metabolism
120641001
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
120641001
00220 Arginine biosynthesis
120641001
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120641001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120641001
Enzymes [BR:
pvir01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.2 glutamine synthetase
120641001
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120641001
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Gene cluster
GFIT
Motif
Pfam:
Gln-synt_C
Gln-synt_N
Motif
Other DBs
NCBI-GeneID:
120641001
NCBI-ProteinID:
XP_039772883
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All DBs
Position
1K:complement(50225188..50228695)
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AA seq
356 aa
AA seq
DB search
MACLTDLVNLNLSDTTEKIIAEYIWIGGSGMDLRSKARTLSGPVTDPSKLPKWNYDGSST
GQAPGEDSEVILYPQAIFKDPFRKGNNILVMCDCYTPAGEPIPTNKRHSAAKIFSNPEVA
AEEPWYGIEQEYTLLQKDTNWPLGWPVGGFPGPQGPYYCGIGADKSFGRDIVDSHYKACL
YAGINISGINGEVMPGQWEFQVGPSVGISAGDQVWVARYILERITEIAGVVVTFDPKPIP
GDWNGAGAHTNYSTKSMRNEGGYEVIKAAIEKLKLRHKEHIAAYGEGNERRLTGRHETAD
INTFSWGVANRGASVRVGRETEQNGKGYFEDRRPASNMDPYVVTSMIAETTIIWKP
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcctcaccgacctcgtcaacctcaacctctcggacaccacggagaagatcatc
gccgagtacatatggatcggtggatctggcatggatctcaggagcaaggccaggaccctc
tccggaccggtgaccgatcccagcaagctgcccaagtggaactacgacggctccagcacc
ggccaggcccccggcgaggacagcgaggtcatcctgtacccgcaggctatcttcaaggac
ccattcaggaagggcaacaacatccttgtcatgtgcgattgctacaccccagctggcgag
ccaattcccaccaacaagaggcacagcgccgccaagatcttcagcaaccctgaggttgcc
gctgaggagccctggtatggtattgaacaggagtacaccctccttcagaaggacaccaac
tggccccttgggtggcctgttggtggcttccctggccctcagggtccttactactgcggt
atcggcgccgacaagtctttcgggcgcgacatagttgactcacactacaaggcttgcctg
tatgccggtatcaacatcagtggcatcaacggggaggtcatgccaggacagtgggagttc
caagttggcccatccgtcggcatttccgccggtgaccaggtgtgggttgctcgctacatt
cttgagaggatcaccgagatcgccggagtggtggtgacattcgacccgaagcccatcccg
ggcgactggaacggtgccggtgcccacacgaactacagcaccaagtccatgaggaacgag
ggcgggtacgaggtgatcaaggccgcgatcgagaagctgaagctgcggcacaaggagcac
atcgccgcctacggcgagggcaacgagcgccggctgaccggcaggcacgagaccgccgac
atcaacaccttcagctggggagtggccaaccgtggcgcgtcggtgcgcgtgggccgggag
acggagcagaacggcaagggctacttcgaggaccgccggccggcgtccaacatggacccc
tacgtggtgacctccatgatcgccgagaccaccatcatctggaagccctga
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