Panicum virgatum (switchgrass): 120641013
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Entry
120641013 CDS
T07260
Name
(RefSeq) protein disulfide isomerase-like 5-2
KO
K09580
protein disulfide-isomerase A1 [EC:
5.3.4.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120641013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120641013
04131 Membrane trafficking [BR:
pvir04131
]
120641013
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120641013
Enzymes [BR:
pvir01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.4 Transposing S-S bonds
5.3.4.1 protein disulfide-isomerase
120641013
Chaperones and folding catalysts [BR:
pvir03110
]
Protein folding catalysts
Protein disulfide isomerase
120641013
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
PDI family proteins
120641013
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
120641013
Exosomal proteins of colorectal cancer cells
120641013
Exosomal proteins of bladder cancer cells
120641013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thioredoxin
Thioredoxin_6
Thioredoxin_2
Thioredoxin_8
Calsequestrin
Thioredoxin_7
DUF6568
GPKOW_C
Motif
Other DBs
NCBI-GeneID:
120641013
NCBI-ProteinID:
XP_039772896
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All DBs
Position
7K:complement(32506173..32508889)
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AA seq
418 aa
AA seq
DB search
MGTRVLPPALLPLLLLLLLPLSARATAAAGEEFPRDGRVIDLDESNFEAALGAIDFLFVD
FYAPWCGHCKRLAPELDEAAPVLAGLSEPIVVAKVNADKYRKLGSKYGVDGFPTLMLFIH
GVPIEYTGSRKADQLVRNLKKFVAPDVSILESDAAIKNFVENAGTSFPMFLGFGVNESLI
AEYGRKYKKRAWFAVAKDFSEDIMVAYDFDKVPALVAIHPKYKEQSLFYGPFEGNLLEDF
VRQSLLPLVVPINTETLKMLNDDERKVVLTILEDDSDENSTQLVQILRSAASANRDLVFG
YVGIKQWDEFVETFDVSKSSQLPKLLVWDRNEEYELVDGSERLEEGDQASQISQFLEGYR
AGRTTKKKVSGPSFMGFLNSLVSMNSLYILIFVIALLVVMVYFAGQDDTPQPRRVHEE
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggggactcgagtcctgccgccggcgctgcttcctctcctcctcctcctgctgctcccg
ctctcagcccgcgccaccgccgccgcgggcgaggagttcccgcgcgacgggcgggtgatc
gacctggacgagagcaacttcgaggccgccctgggcgccatcgacttcctcttcgtcgac
ttctacgccccgtggtgcggccactgcaagcgcctcgcgcccgagttagatgaagctgcg
ccggtgttggcagggttgagtgagcccatcgtagttgccaaagtaaacgctgacaaatac
aggaaacttggatcaaaatatggagtagatgggttccctaccctgatgctttttatccac
ggggtcccaattgaatacactggttcaaggaaagctgaccagcttgtccgcaatctgaag
aagtttgttgcgccagatgtttctatccttgagtcagacgctgcgataaagaactttgtt
gagaatgctggtacaagctttcctatgttccttggttttggggtgaatgagtcattgatt
gctgaatatggaaggaaatacaagaaaagagcttggtttgctgttgcaaaagatttctcc
gaggatatcatggtagcctatgattttgataaggttccagcactagttgcaatacatccg
aagtataaggaacaaagtttattctatggcccatttgaaggaaatttgttggaagatttt
gtacggcaatccctgctccctttggttgtcccaatcaatacggagacactaaaaatgctg
aatgatgatgagaggaaagttgttctcacaattttggaggatgattcagatgaaaattct
acacaactggtacaaatcttgagatctgctgctagtgcgaaccgtgatttggtgtttgga
tatgttggaatcaagcaatgggatgagtttgtggagacttttgacgtttccaagagctca
cagctgccaaagctgctggtgtgggatagaaacgaggagtatgagctagtggatggttca
gagagattagaagaaggtgaccaagcatcccaaataagccaattcctggagggatacaga
gcaggaagaaccacaaagaagaaagtcagtggcccttctttcatgggtttcctgaactct
ctggtcagcatgaattcgctgtacatccttatatttgtcattgctcttctggttgttatg
gtgtactttgctgggcaagatgatactcctcagccaagacgagttcatgaagagtga
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