Panicum virgatum (switchgrass): 120641125
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Entry
120641125 CDS
T07260
Name
(RefSeq) translation initiation factor IF-2-like isoform X1
KO
K02519
translation initiation factor IF-2
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pvir03012
]
120641125
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120641125
Translation factors [BR:
pvir03012
]
Eukaryotic type
Initiation factors
MTIFs
120641125
Prokaryotic type
120641125
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
120641125
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
EF-G_D2
MMR_HSR1
FeoB_N
PduV-EutP
GTP_EFTU_D2
RsgA_GTPase
Arf
Ras
SRPRB
Roc
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
120641125
NCBI-ProteinID:
XP_039773045
LinkDB
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Position
7K:33922525..33931940
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AA seq
712 aa
AA seq
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MAWRMLRRKELHTSLLNLAFRADRGGKKHFSNGAIGNLAQFYRSDRTKHAASCMPSSHFT
IIRNFHAGVYMLAWSRKKEDVVGLKAPKKEKRVKKENRTQPPVEAPYVAPKLKIATKSPD
KTVEIFDGMTLLDLSKRTGAYISTLQGILADLGEKVESEFDSINIDLAELVAMELGVNTR
RMHTGEGTNEPRPAVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHIGAFVVEMPSG
ASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAMSHAKAANVPVVVAI
NKCDKSGADPERVRIQLGSEGLLLEDMGGDVQVVEISAVAKSGLDKLEEALLLQAEMMDL
KARIDGPAQAFVVEARLDRGRGPLATAIVKSGTLVSGQHIVVGAEWGRIRSLRDTAGKIT
ESAKPAMPVEIEGLRGLPMAGDDVVVVDSEERARMLSQGRKKKQEKDRLRKIDEGMADEL
EIKEEAPERVEMPIIVKGDVQGSVQAVTDALRSLNSAQVFVNVVHVGVGPISQHDIDLAQ
ACGAYIVGFNIRTPPIAITQAAARANIKVLLHKVIYHLLEEMGRAIVDKAPGTAETQVSG
EAEVLNIFELKGRSKSKGPDIKIAGCRITDGHFSKSGTMRLLRSGDVVFEGPCSSLKRER
QDAETIEKGNDCGLVIQDCDDFQVGDVIQCLEQVIRKPKFISTQSGSVRIEC
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggcggatgctgcggaggaaggagctccacacgagccttctgaatttggcgttc
cgggcagatcgtgggggtaagaagcatttctccaatggagcgattggaaatctggcacag
ttctaccgcagtgataggaccaaacatgcagctagttgcatgccctctagccatttcact
atcatcaggaattttcatgcaggtgtttatatgttagcatggagtcggaaaaaggaggat
gttgtagggctgaaagctcctaaaaaggagaagcgagtgaagaaagaaaatagaacacaa
cctcctgtagaagcaccatatgttgcaccaaaactgaagatagctaccaaatcaccagat
aaaactgttgagatttttgatgggatgacattgcttgacctctctaaacgaaccggtgca
tatattagtacacttcaaggcatacttgcagaccttggtgaaaaggttgaatcagagttt
gactctatcaacattgatcttgctgagttggttgcaatggaacttggtgttaataccaga
agaatgcacactggtgaaggcacgaatgaaccacgtcctgctgttgtaacagtaatgggc
catgttgaccatggtaaaacatcgcttttggatgctcttcggcaaacatctgttgcagct
aaggaagctggtggtatcactcagcatatcggtgcttttgttgttgagatgccgtcagga
gcatctatcacatttctcgatactccaggacatgctgccttcagtgctatgcgggctaga
ggtgccgctgttacagatattgtagtccttgtggtggcagcagatgatggtgttatgcct
cagacgcttgaagctatgtctcatgcaaaagcagcaaacgttcctgttgtagttgccata
aacaaatgtgataaatctggagctgatcctgagagggtcagaattcaacttggttcagaa
ggcttgcttttggaggatatgggtggagatgtgcaggttgttgaaatctctgccgtagca
aaatctggtttggataaattggaagaggctttgctccttcaagctgagatgatggacctg
aaagccagaattgatggccctgctcaggcttttgtggtggaggcaaggttggacaggggt
aggggtccactggcaacagctatagtcaagtctggcacattagttagtgggcaacacatt
gttgtaggagcagagtggggaagaattagatctcttagagacacggcaggaaaaattaca
gagtctgcaaaaccagcgatgcctgttgagattgaggggttaaggggccttccaatggct
ggagatgatgtcgtggttgttgattcagaggaaagggcaagaatgcttagtcaagggcgg
aagaagaagcaggagaaagatagacttcgaaagattgatgaaggcatggcagatgagcta
gaaattaaagaagaggctcctgaaagagtagaaatgcccattattgtcaaaggtgatgtt
cagggcagcgttcaagctgttacagatgcattaaggagtcttaatagtgcgcaggttttt
gtgaatgttgttcatgtaggtgttggtccaattagtcagcatgacattgatctggcacaa
gcatgcggagcgtatatagttggtttcaacattcgcactcctcctattgctatcactcaa
gcagcagcaagagccaacataaaggttttgctgcacaaggttatctatcatctccttgag
gaaatgggaagggccattgtggataaggcaccagggactgctgaaacccaggtttcgggg
gaggctgaggttctgaacatattcgagctgaaagggcgaagcaagtccaaaggaccggac
atcaaaattgctggctgccgtataactgacggtcactttagcaaatctggaaccatgaga
ctgttgaggagtggagatgttgtatttgagggtccctgttcatctctgaagcgggagagg
caggatgcagaaacaatagaaaagggtaatgactgtggactggtgattcaggattgcgac
gatttccaggttggggatgttatccagtgcttggagcaggtgattaggaagcccaagttc
atctcaacgcagagtggttcggttcggattgaatgctaa
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