Panicum virgatum (switchgrass): 120641184
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Entry
120641184 CDS
T07260
Name
(RefSeq) dynamin-2A-like
KO
K01528
dynamin 1/3 [EC:
3.6.5.5
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
pvir05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120641184
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120641184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120641184
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120641184
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
120641184
Membrane trafficking [BR:
pvir04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
120641184
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
120641184
RhoA-dependent endocytosis
120641184
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120641184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_N
Dynamin_M
GED
PH
PH_11
MMR_HSR1
PH_8
Apyrase
ARGLU
VPS8_N
AIG1
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
120641184
NCBI-ProteinID:
XP_039773121
LinkDB
All DBs
Position
1K:complement(50701423..50711176)
Genome browser
AA seq
922 aa
AA seq
DB search
MSSAAAMEAIDELVQLSESMRQAASLLADDDPSDETASRRPSTFLNAVALGNVGAGKSAV
LNSLIGHPVLPTGENGATRAPIVVDLERDPGLSSKSIVLQIDSKSQQVSASALRHSLQDR
LSKGASGGSGRGRSDEIYLKLRTSTAPPLKLIDLPGIDQRVMDDSTISEYAGHNDAILIV
VIPAMQAADVASSRVLRLAKDIDPDGTRTIGVLSKVDQAAADAKTVSCVQAILSNKGAPR
AAADIEWVALIGQSVSIASAQSGSVGSENSLETAWRAEAETLKSILTGAPQSKLGRIALV
DTIAKQIRKRMKIRLPNMLSRLQGKSQIVQDELARLGESMVQSAEGTRAVALELCREFED
KFLAHITSGEGSGWKIVASFEGKFPDRIKQLPLDRHFDLNNVKRIVLEADGYQPYLISPE
KGLRSLIKGVLEMAKEPSRLCVEEVHRVLLDIVNAAANATPGLGRYPPFKREVIAIASSA
LDAFKSDAKKMVVALVDMERAFVPPKHFIRLVQRRMERQRREDELKNSRSSKKGQDTDQS
KMNRASSPQTGSDETGGNLKSMKDKSNQQDKDTKEGPNLQVAGPGGEITAGYLLKKSAKD
NKWSRRWFVLNEKSGKLGYTKKQEERHFRGVIVLEECNLEEIEEGEISKSSKDSKKANGQ
EKGPSLVFKITNRVAYKTVLKAHSAVILKAESMADKVEWIKKIKGVIQSKGGSVKGPNTP
EDGSMRQSRSDGSLDTMARRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVE
KSKEDMLNQLYSSISAQSNAKIEELLQEDQNAKRRREKYQKQSSLLSKLTRQLSIHDNRA
DSYGNDSSGAESPRSPGQSGEDWKSAFNSAANGSVDRSSSQHETRSRSADSRGRRYENGD
ANSGSRRTPNRLPPAPPSGGRY
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggcggcagccatggaggccatcgacgagctcgtccagctctccgagtccatg
cggcaggccgcctccctcctcgccgacgatgacccatccgacgagaccgcctcgcgccgc
ccatccaccttcctcaacgccgtcgcgctcggcaacgtcggcgctggcaagtccgccgtg
ctcaacagcctcatcggccaccccgtgctgcccacaggggagaacggggcgacgcgggcg
ccgatagtggtcgacctggagagggatccggggctcagcagcaagtccatcgtcctgcag
atcgacagcaagtcacagcaggtgtcggcaagtgcactacggcattcgctgcaggatagg
cttagcaaaggggcatccggtggatctgggagaggccgaagtgatgaaatttaccttaag
ctgcggacaagtacagctcctcccctgaaattgattgatttacctggcatagaccaacgt
gttatggatgattcaacgatcagtgaatatgctggacacaatgatgcaatactgattgtt
gtgatacctgcaatgcaagctgctgatgttgcatcttctcgagttcttagactagcgaaa
gatattgatccagatggaactagaacaataggtgtcttaagcaaagtcgatcaagccgct
gcagatgcaaaaactgtttcttgtgttcaggccattttgtccaacaagggtgccccacga
gcagcagctgatattgagtgggttgctctaataggacagtctgtctcaattgcatctgct
caatcaggatcagttgggtctgagaattcactggaaacagcttggcgagcagaggctgaa
acacttaaatccattctaactggcgcacctcagagtaagctggggagaattgctctcgtg
gacaccattgctaagcaaatacgtaaacggatgaaaattcggctgcctaacatgctgagc
agacttcagggtaaatcccagatagtgcaagatgagcttgcaaggctaggagaatcgatg
gtacaaagtgctgaaggaaccagagcagttgctctggagctgtgtcgagaatttgaagat
aaatttcttgctcatattacttctggtgaggggtctggttggaaaattgttgcaagtttt
gagggcaagtttccagataggatcaaacagcttccactggacaggcattttgatttgaac
aatgtgaagaggattgtcttggaagcggatggttatcaaccttatttgatatctcccgag
aaaggtttaagatccttaataaaaggagttctggaaatggccaaggagccatcacgactc
tgtgttgaagaggtacaccgtgttttgttagatatagtaaatgctgctgcaaacgctaca
ccagggctaggaagataccctccattcaagcgtgaggtcattgcaattgcatctagcgca
ttagatgctttcaaaagtgacgcaaaaaagatggtggttgcacttgttgatatggagcga
gcttttgttcctccaaaacacttcatccgattagtacagagaagaatggaaagacagcgt
cgtgaggatgagttgaaaaatagcaggtcgtctaagaaagggcaagacacagatcaatcc
aagatgaacagggcttcaagtccccaaacaggatcggacgaaactggtggtaacctgaaa
tcaatgaaggataaatctaatcagcaagataaggatacaaaagaaggaccaaatttgcag
gttgctgggcctggtggcgaaataactgcaggttaccttttgaagaaaagtgcaaaagat
aataaatggagcagaaggtggtttgttctaaatgagaagagtgggaagcttggatacact
aagaagcaagaggagagacattttcgaggtgtcattgtcctggaggaatgtaacctggaa
gagatagaggagggagagatttctaagagttctaaggactcaaagaaggcaaatgggcaa
gaaaaaggaccaagtcttgtttttaagattactaacagggtagcctacaaaactgtctta
aaagctcacagtgccgttatattgaaggctgagagtatggccgacaaagttgaatggatc
aagaagataaaaggtgttattcaaagcaaagggggctctgttaagggtccaaatactcct
gaggatggttctatgagacaaagccgctctgatggatcccttgatacaatggctcggagg
cctgctgatcctgaagaagaacttcggtggatgtctcaagaagttcgtggttatgttgag
gctgttttgaacagtttggcagcaaatgttccaaaggctatcgtactttgccaagtggag
aaatcaaaagaggatatgctaaaccagttgtacagctcaataagtgcacaaagcaatgca
aagatcgaagaactactccaagaggaccaaaatgctaaacgtaggcgtgaaaagtaccaa
aaacaatcatccctcttgtcaaagcttactcggcagctcagcatccatgataacagagca
gattcgtatgggaacgatagttctggagctgagagcccgcggtcccctggccaatctggt
gaggactggaaatctgccttcaattctgcagcaaatggctctgttgacagatccagttca
cagcatgagacaaggtcaagaagtgctgacagtcgtggccggcgctatgaaaatggggat
gccaattctggcagccggcgcacacctaaccggttgccaccagcaccaccgagtgggggg
agatattaa
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