Panicum virgatum (switchgrass): 120641188
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Entry
120641188 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120641188 isoform X1
KO
K14827
pre-rRNA-processing protein IPI1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120641188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120641188
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
120641188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ipi1_N
TOR1L1_N
HEAT_2
Motif
Other DBs
NCBI-GeneID:
120641188
NCBI-ProteinID:
XP_039773125
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Position
7K:complement(35737982..35746621)
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AA seq
898 aa
AA seq
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MGRPKGGAAASSSASSKKPKPKPKQRGGVDFKKYKHKVGRKLPPPKNATSTEIKSKTIVL
PEQSMASERAGMAVNKRGLTLRELLQQTAHYNANVRRAALNGIKDIVVKHPTELKLHKVA
IIEKLQERICDTDKVVRESLYSILQSMIFPSLKEDNAISTRSTLFLLMANILNGMTHLSI
DIQLMAFRFLELVVLNFPSSFSSYAEQAFNNFIAVLSNDRINLHDRNKLNSVLSGLGHCL
SLVAKTMENDDISNRQVHDLSARELWKCTSDEDNSVGRAFAMPNLLVKLQSLVQILINSV
EVSASELCAKSAIDASSSEALLSALHCLDIICRIFIHEVKKPQLRFSISKTQFGPDWLRS
SLLIHLKNLWGVKRLFHEKEDGKFFIFNLKIAEIFLCLSAWIDSTMFPAEEFCHFVSSLF
AKQAKTLRNKDLMEMYLSPIITCIPDLIFNAPDDSKEHLLEAFTDAFRGCKVDCKLIFPY
LDAVGEMLLPEKTGTWFAEDGSGVLGYHDVWIHELPRILLQSIDKAPSVTKVVLELLLRI
GQYFPTLDCENLRPFIKLFGVESSSGAVELGPFVNLARDCQELATSCLYYFPSLLPDIIG
PLASCCLSDALEPLVLFRVVEVLQSTYKAGSLQITELLSFLLLLMARFRVHPGGLVTSGN
PSKVSNWDTFKSLNRLILTSLSEMGDGSLVLELMWNNLSNAIAKKPSMHNMNGLFRIIVT
LDAGTNKLMNEDAVKLIAGYLVDASLDLSKTIEGGFQPDKTRLFQYFIKPCTIMFDKNDK
VLCSTLEMLKSFITGDDHLLSSLSNFNYPGELSCRVCAVTTILIFLCNDRKLHRNLSFGK
SVIKGILDYIRHQLGSSGPNVTYEEKQKLRSAFEQLKTKALQLNCWDRSELEGLSITR
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggggcggccgaagggaggcgcggcggcctcttcctccgcctcctcgaagaagcccaag
cccaagccgaagcagcgcggcggcgtcgacttcaagaagtacaagcacaaggtcgggcgc
aagctgccgccgccgaagaatgccaccagcacggagatcaaatccaaaacgatcgtgctg
ccggagcagagcatggcctcggagagggcgggcatggcggtgaacaagcgtgggctcacg
cttcgggagcttctgcagcagacggcccactataatgccaatgtgcggcgagctgcactg
aatggaatcaaggacattgttgtcaagcacccaacagagcttaaactgcacaaggttgct
ataattgagaagctgcaggaaaggatatgcgatactgacaaggtggtccgtgaatcatta
tacagtatactgcagtctatgatcttcccatctttgaaagaggataatgctatatcgacc
cggagtacactgtttctgctgatggctaatattctgaatggaatgacccatctatctatt
gatatccagttaatggctttccgttttttggagcttgtggttctcaatttcccatcgtcc
ttttctagttatgctgaacaggctttcaacaactttattgcggtactgagcaatgataga
atcaacctacatgataggaacaaacttaacagtgtccttagtgggcttggacattgcctt
tctttggttgctaaaacgatggaaaatgatgatatatcaaatcgacaggttcatgacctc
tctgcaagggaactttggaaatgtacctctgatgaagataactcagtaggcagagcattt
gcaatgcccaatttattagtgaagcttcagagccttgtccaaattctcattaattctgta
gaggtttcagcctcagagctctgtgcaaagtcagctattgatgcatcatcaagtgaagca
ttgttatcagccctccattgtctggatataatatgtaggatatttattcatgaagtgaag
aaacctcagttaagattttccatatccaagactcagtttgggcctgactggttgagaagt
tccttattgatacatctaaagaatttatggggcgtgaagcgtttgtttcatgaaaaggaa
gacggcaaatttttcattttcaatttgaagattgctgaaatctttctgtgcttgagtgca
tggatagatagcacaatgtttccagctgaagaattttgccattttgtatcttctctattc
gcaaagcaggcaaagacacttcgcaataaggatctcatggaaatgtatttgagccccatt
ataacttgcataccggatcttatattcaatgccccagatgactcaaaagaacatttgttg
gaggcatttacagatgcatttagaggttgcaaggtggattgcaagctaatctttccatat
ttggatgcagttggagaaatgctgcttcctgagaaaacaggcacatggtttgctgaagac
ggttcaggcgtgctgggctatcatgacgtgtggatacatgagttaccccgaattttgctg
caatcaattgataaagccccctcagttacaaaggttgttttggagcttcttctaagaatt
ggacaatactttcccacattggactgtgaaaacctgcgtcccttcataaagttatttggt
gttgaatcatcatcaggagctgtggagcttggcccttttgttaacctagctcgtgattgc
caagaacttgccacttcatgcctttattactttcccagtctgctccctgacataattggg
ccattggcctcgtgttgcttaagtgatgcactggaacccctcgtactgttcagggtcgtt
gaggttctacagtcaacatacaaggctggtagtttacagataacagaactactcagtttt
ttgttgctgctaatggcaagattcagagttcatcctgggggtttagttacttcagggaat
cctagtaaggtctcgaattgggacactttcaagtcgttgaatcgtctaattttaacttcc
ctatctgaaatgggtgatggctctctggtcctcgaattgatgtggaataatttatctaat
gcgattgctaaaaaaccatcgatgcataacatgaacggcttgtttagaattattgttaca
cttgatgcaggaactaataagctcatgaatgaagatgccgtaaagcttatagctggctac
ttggttgatgcttctttggatctgtctaagaccattgaaggtggttttcaacctgataag
acaagattatttcagtactttatcaagccctgcaccatcatgtttgacaagaatgacaag
gttctttgcagcacattggagatgcttaagtcttttataacaggagatgatcacctgctt
tcatctctctccaactttaactacccaggagagctatcatgtcgagtttgtgctgtcaca
accatactcatcttcttatgcaatgaccggaaactccataggaatctttcttttggcaaa
tcagttattaaaggcatcctggattatataaggcatcagctgggttctagtgggcctaat
gtgacgtatgaagaaaaacagaagttaagatctgctttcgagcaactgaagaccaaagca
ttgcagttgaactgctgggatagaagtgagctggaagggctgtcaatcacaagataa
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