Panicum virgatum (switchgrass): 120641213
Help
Entry
120641213 CDS
T07260
Name
(RefSeq) probable WRKY transcription factor 2 isoform X1
KO
K18835
WRKY transcription factor 2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120641213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120641213
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
WRKY
120641213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WRKY
Motif
Other DBs
NCBI-GeneID:
120641213
NCBI-ProteinID:
XP_039773168
LinkDB
All DBs
Position
7K:complement(36076053..36082316)
Genome browser
AA seq
726 aa
AA seq
DB search
MHMDYGACSQHLWMQEGRDPNPGPSSLMRGLQTEAFLPDTEVAKAGFEKDGLSAAIRSPR
EEGRSLPMTPQFGHKSSPGSTLAERMQARAGFRVPKLSMPFSTAVAADNSVPGAPSPYLT
IPPGLSPATLLDSPVFISNAMGQASPTTGKLFMLGSTNDNDPIRYGGPLLGDGPDSFSFK
PLDLKSSHYTAEGKKESLCNNQPPLPSTHVSVKTETKIQPVQEANLLGQLNQQNHSRQSN
MKSGSHDPNSKLSRLATVTGAGNDHVSSPHSQPAEEGDTRGDYHPAMAATTPAEDGYSWR
KYGQKQVKHSEYPRSYFKCTHPNCQVKKKVERSHEGHITEIIYKGTHSHPKPAQSRRPGV
PPVHPFVEGAQADAPDNPRPHTNTAEARQAWHNNAGVKDLPGDGMDAASPPSVPGELCDS
SASMQIHDAGGVDATSAATAGSDEVDGEDRVTHGSMSQGGGGADADGDELESKRRKLESY
TIDMSAASRAVREPRVVIQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCSV
RKHVERASHDLKSVITTYEGKHNHEVPAARNSGGHPSAATAAGAAAGRRPEHPSVHDGLM
RHLAGGCGGAPFGLRPAPPSRDPMTPMLNYPTYAAAAGGLGGGGGGPASLPSLPMPGGPL
GPVEGLKLPMLAPPSLHQHPLLRHRQAMQAAGLVPPKADVKVEGSGAPPPSVYQLMRSGL
PLGHQM
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgcatatggattatggtgcttgctcccaacacttgtggatgcaggaggggagggatcct
aatccaggcccatcatccttgatgcggggcttgcagaccgaagcatttctaccagacacc
gaggttgccaaggccggatttgagaaggatggcttgtcggccgccataaggtcaccacgg
gaggaaggtcggtcgctgccaatgaccccgcagtttggccacaagtccagtccaggcagc
accctcgctgagaggatgcaggcaagagctgggttcagggtgccaaagctcagcatgccg
ttcagtacagcagttgcagctgataattcagtgccaggagctccatcgccctacctcacc
atcccgcctggtttgagcccggcaacgctgctggactcaccagtcttcatttccaatgcc
atgggccaagcttcgccgaccacagggaagttattcatgcttggtagcacaaatgacaat
gatcctattagatatggaggccctctacttggagatggccctgattcattttctttcaag
cctttagacctgaaatcctcacactacactgctgaaggaaagaaggaatctttatgcaac
aatcagcctccactaccaagcacccacgtttctgtcaagactgaaactaagattcagcca
gtacaagaggccaatctgctgggccaactgaaccagcagaatcacagcaggcagagcaat
atgaagagtggttctcatgaccccaactccaagctcagccgtcttgcaactgtcaccggt
gcaggcaatgaccacgtatcatcgccgcacagccagcctgcagaggaaggcgacacgagg
ggagactaccacccggcaatggccgccaccacaccggcagaggacggatacagctggagg
aagtacgggcagaagcaggtgaagcacagcgagtacccgcggagctacttcaagtgcacg
cacccgaactgccaggtgaagaagaaggtggagcgatcccacgaggggcacatcacagag
atcatctacaagggcacgcacagccacccgaagcccgcgcagagccgccggccgggcgtc
ccgcccgtgcacccgttcgtggagggcgcgcaagcggacgcacccgacaacccaaggccg
catacaaacacggcggaggcgaggcaggcgtggcataacaatgcgggtgtcaaggacctg
cccggcgacggcatggacgcggcatcgcccccctctgtccccggtgagctctgtgactcg
tcggcgtcgatgcagatccacgacgccggtggcgtggatgccacctctgcagccaccgca
gggtccgatgaggtggacggggaagacagggtgactcatggcagtatgtcccagggcggt
ggcggtgccgacgccgatggcgacgaactggaatccaagcgaaggaagctggagtcttac
accattgatatgagcgctgcgtccagagctgttcgcgagccccgggtggtgatccagacg
acgagcgaggtggacatcctcgatgacggctaccgctggcgcaagtacgggcagaaggtc
gtcaagggtaacccaaatccaaggagctactacaagtgcacgcacccgggttgctcggtg
cggaagcacgtggagcgcgcgtcgcacgacctcaagtcggtgatcaccacgtacgagggc
aagcacaaccacgaggtcccggccgccaggaacagcggcggccacccgagcgcggcgacg
gcggcgggcgcggccgccgggcgcaggccggagcacccgtcggtgcacgacggcctgatg
aggcacctggccggcggctgcggcggcgcgccgttcggcctgcggccggcgccgccgtcc
cgggacccgatgacgccgatgctcaactacccgacgtacgccgccgccgccggcggcctc
ggcggcggcggcggcggccccgcgtcgctgccgagcctgccgatgcccgggggccccctc
gggccggtagaggggctgaagctgcccatgctggcgccgccgtcgctgcaccagcacccg
ctgctgaggcaccggcaggcgatgcaggccgccgggctcgtgccgcccaaggcggacgtg
aaggtcgagggcagcggcgcgccgccgccgtcggtgtaccagctgatgcgcagcgggctg
ccgctgggccaccagatgtag
DBGET
integrated database retrieval system
