Panicum virgatum (switchgrass): 120641329
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Entry
120641329 CDS
T07260
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI8
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120641329
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
120641329
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
120641329
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
UBA_ARI1
Ariadne
UBA_ARIH2_N
zf-C3HC4_2
zf-C2H2_Trps1_5th
Motif
Other DBs
NCBI-GeneID:
120641329
NCBI-ProteinID:
XP_039773336
LinkDB
All DBs
Position
7K:37655325..37664046
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AA seq
589 aa
AA seq
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MDSEDDMHDANDSADDDFYSGGEAGLPGSDDGDGDYDFADHDSDDSGELLSHRQQQNYSI
LSEVDIKQRQEDDINRVSTVLSISKSEACVLLRNYNWSVSKVHDEWFADEERVRKIVGLP
EKHMELPNDREVICGICFESCPRGMMSAAVCGHPFCSTCWRGYISTAINDGPGCLMLRCP
DPSCAAAVGQDMINALADDEDKEKYGRYLRRSYIEDNRKTKWCPAPGCEYAVEFVMGSGS
YDVNCNCSYGFCWNCTEEAHRPVDCATVSKWILKNSAESENMNWILANSKPCSKCKRPIE
KNQGCMHITCTPPCKFEFCWLCLGPWSEHGERTGGFYACNRYESARQEGAYDESERRREM
AKNSLERYTHYYERWAANQSSRQKALGDLQSLQNDKLEKLSDIQSQPESQLKFIIEAWLQ
IVECRRVLKWTYAYGFYLPEHEHAKRQFFEYLQGEAESGLERLHQCTEKELQVYLEAESP
SKDFNDFRTKLAGLTSVTRNYFENLVRALETGLNDVGPSTSHGTCSRSATSKSLGGKSKS
GKNRASSTSSKSGGSNRGLDDSNIWICDQCTFANPKSARACQACDRQHR
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggactccgaggacgacatgcacgacgcgaacgactctgccgacgatgacttctacagc
ggcggggaggccgggctccccggcagcgacgacggggacggcgactacgacttcgccgac
cacgactccgacgactctggggagctcctctcccaccggcagcagcaaaattacagcata
ctcagtgaagttgatatcaagcagcgccaagaagatgacataaatagggtttcaactgtt
ctttcaatttctaagtcagaagcatgtgttcttcttcgcaactataactggagtgttagt
aaggtgcatgacgaatggttcgccgatgaagagcgtgttcgtaagattgttggcttacca
gagaagcacatggaactgccaaatgacagagaagtgatatgtggaatatgttttgaaagt
tgccctcgtggcatgatgagtgctgctgtatgtggtcatcctttctgcagtacatgttgg
agaggttacattagcactgctataaatgatggtccagggtgtttgatgttgaggtgtcct
gatccatcctgtgctgctgctgttggacaagatatgataaatgcactggctgatgatgag
gataaggaaaagtatgggagatatcttcgcagatcttacattgaagataacagaaagaca
aaatggtgtcctgctcctggatgtgaatatgcagtggaattcgtcatgggcagtggcagc
tatgatgtcaattgtaattgttcatatggattttgttggaattgcactgaggaagctcat
cgtccagtagactgtgcaactgtttcaaagtggatcctcaagaacagtgctgaatcagag
aatatgaactggatactggctaattcaaagccttgttctaaatgcaagcgacctattgaa
aaaaatcagggatgcatgcacatcacatgcactcctccatgcaaatttgagttctgctgg
ctgtgtcttggtccatggtcggagcatggagagagaactggtggattttatgcttgtaac
cgctacgagtcggcaaggcaagaaggagcgtatgatgaatctgaaaggagaagagaaatg
gccaagaactcccttgagagatatacacattattatgaacgatgggcagccaatcaatct
tcaaggcaaaaagcgttgggagatcttcaaagtctgcagaatgacaagcttgaaaagttg
agtgacatacaaagccaacctgagtcacagctgaagttcatcatagaggcatggttacag
attgtcgaatgtagaagggtattgaagtggacttatgcctatggattttacctgccagag
catgagcatgccaaaagacagttctttgaatatctgcaaggcgaggcagaatccggtttg
gagcggttgcatcaatgtacagagaaagaacttcaagtataccttgaagccgaatctccc
tcaaaagatttcaatgatttccgtacaaagctagctggattaactagtgtgactcgcaat
tattttgaaaatcttgtccgggctttggaaactggattaaatgatgtgggtccttccact
agccatggcacatgcagcagaagtgcaacttccaagagtcttggtggtaaaagtaagagt
ggcaagaacagggcatcaagcaccagctccaaatctggtggctcaaacagaggtttggat
gacagcaacatttggatatgcgatcagtgcacatttgcaaaccctaaatcagccagagcc
tgccaggcctgtgatcgccaacatcgatag
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