Panicum virgatum (switchgrass): 120641347
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Entry
120641347 CDS
T07260
Name
(RefSeq) transcription factor MYB17-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120641347
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120641347
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
IATP
Motif
Other DBs
NCBI-GeneID:
120641347
NCBI-ProteinID:
XP_039773354
LinkDB
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Position
7K:40681656..40683502
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AA seq
384 aa
AA seq
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MPCPFPSSLQACRQQQQQVKIRCIYGHRDPPRPINPSAFMATAPPPSLTCRHCRRHRGRK
RESDRRRSVAAAAAAAMGRTPCCDSKGIKKGPWAPEEDKLLVDFVQANGPGNWRMLPKLA
GLNRCGKSCRLRWTNYLRPDIKRGPFTTEEHNSILQLHAIVGNKWSMIAAQLPGRTDNEI
KNYWNTHLKKQLRQEALAGADATAAAQLAAAATASSCPATRHMAQWEAARLEAEARLSLL
SSSAATTVTSATAASSSSSTAAAAEHEAAPDIFLRLWNSAVGESFRCSASLGQGAAAAHG
PAAAAGAPAALPPATAPSGGGGGGGGDSSAASTNGTEAADDYQAFLDMAVEELALLHGRL
GVSFSAFPPADMLAEASCLFAPFE
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgccatgccccttcccgtcgtcgttgcaggcttgcaggcagcagcagcagcaggtgaaa
atccgttgcatttatggccaccgggatcctcctcggcctataaatccgtcggcatttatg
gccacggctcctcccccctcactcacctgtcgtcactgccgacgccaccgagggagaaag
agggagagcgaccgacgacggtctgttgcggcggcggcggcggcggccatggggaggact
ccgtgctgcgacagcaaggggatcaagaagggcccgtgggcgcccgaggaggacaagctg
ctcgtcgacttcgtccaggccaacgggccaggcaattggcgcatgctccccaagctcgcg
gggctgaaccggtgcggcaagagctgccggctccggtggaccaactacctgcgcccggac
atcaagcgcgggcctttcaccaccgaggagcacaattccatcctccagctccacgccatc
gtcggcaacaagtggtccatgatcgcggcgcagctgccgggccggacggacaacgagatc
aagaactactggaacacgcacctcaagaagcagctccgccaggaggcgctcgccggcgcg
gacgccaccgccgccgcccagctcgcggccgcggcgaccgcgtcctcctgccccgccacg
cgccacatggcccagtgggaggccgcccgcctcgaggccgaggcgcgcctctccctcctc
tcgtcctcggccgccacgacggtaacctccgccacggccgcctcctcgtcgtcgtccacc
gccgccgccgccgagcacgaggcggcgccggacatcttcctgcgcctctggaactccgcg
gtcggggagtccttccgctgctccgcgtcgctgggacagggtgcagccgcagcgcatggt
ccggctgcggcagctggtgcgccggcggctctgccgcctgcgacggcgcccagcggcggc
ggcggcggcgggggcggcgactcatcggccgcgtcgaccaacgggaccgaggccgcggac
gactaccaggcgttcctggacatggcggtggaggagttggcgctgctgcacggccggctc
ggcgtgtcgttctcggcgttcccgccggcagacatgctcgccgaggcgtcctgtctgttc
gcgccgttcgagtga
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