Panicum virgatum (switchgrass): 120641398
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Entry
120641398 CDS
T07260
Name
(RefSeq) poly(U)-specific endoribonuclease-B-like isoform X1
KO
K14648
poly(U)-specific endoribonuclease [EC:3.1.-.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
120641398
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Gene cluster
GFIT
Motif
Pfam:
XendoU
Motif
Other DBs
NCBI-GeneID:
120641398
NCBI-ProteinID:
XP_039773427
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Position
7K:41291521..41294840
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AA seq
472 aa
AA seq
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MERLIKGLVHVAIDAVEDAVRDRGHGRGGGGDDDDEAPRRGAPQCADGEEDRDERSRSTW
AEVVSEHKGGGPDDERRDHRNSGRDKRHERRDDEGWERVGGRNQQHPAGRQNQQYEGDDR
RDGSSRRPQQHQPAPGYGRQQQEGEGINDGGWQTVGEKKHHGRPLQSEAWNGYRKPPSEQ
QYSEDVDHQGLNVDPTREELNSLSKACSRLWELDMNRLVPGKDYRIDCGEGKKVYQKGDM
ASESLFSWLGDDVLRKPTYSRFCALLDNYNPHQGYKEVVTQQDKHEEVAFIEEIARTAPI
KYLHRYLVQKGEVSQDYEDFKRMLASLWFDLYGRGGNSNCSSAFEHVFVGEIKGRGQGEN
EVSGFHNWIQFYLEEAKGNVDYQGYIFPRRRGESPDSETQLLTVQFEWHGVLKSVSSTLI
GVSPEFEVALYTLCFFVGGEDNRVDIGPYTLNIKCYRLGKNKIGSAFPIAEN
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtctcatcaaggggttggtccacgtggcgatcgacgccgtcgaggacgccgtg
cgggaccggggccacggccgcggcggcggcggcgacgacgacgacgaggcgccgaggagg
ggggcgccacagtgcgccgacggggaggaggaccgcgacgagcggtcgcggtccacgtgg
gccgaggtcgtctccgagcacaagggcggcgggccggacgacgagcgccgggaccatcgg
aattccgggcgggacaagaggcatgaacgaagggatgacgagggttgggagagggtcggc
ggccggaaccagcagcaccccgcaggccggcagaaccagcagtacgagggagacgacagg
agggatggcagcagccggcggccgcagcaacatcagccggcaccaggatacgggaggcag
cagcaggaaggtgaggggataaatgatgggggttggcagactgtcggcgagaaaaagcac
catggaagaccactccagtctgaagcatggaatggatacagaaagccaccatcagaacaa
caatactctgaggatgtcgaccaccaaggactcaatgtggaccctaccagggaggagctg
aacagcttatcgaaagcatgcagcagactatgggagctcgatatgaaccgcctagttcct
ggtaaggactacagaatcgactgtggcgagggaaagaaagtttatcagaagggtgatatg
gcatccgaaagcttgttcagctggctcggtgatgatgtgctacgaaagcccacctactct
cgtttttgtgcacttcttgataactacaacccacaccaggggtacaaggaagttgttacc
cagcaggataagcacgaagaagtagcattcattgaagagattgccagaacagcaccaatt
aagtacttacaccggtacttagtgcagaagggggaagtatctcaggactacgaggacttc
aagagaatgctggcatccctatggtttgatttatatggaagaggtggcaactctaactgc
tcttctgcctttgagcatgtgttcgttggtgagatcaaaggacggggacaaggagagaat
gaggtctcaggcttccacaactggattcagttttacctagaagaagccaagggaaatgtg
gactaccaaggttatatattcccaagacgtcgcggtgaatcacctgattcagagacacaa
ctgctgactgttcaatttgagtggcacggtgtgctgaaatcagtatccagcacgttgatt
ggtgtcagtcctgagtttgaggttgcactctacacattgtgcttctttgttggaggtgaa
gataaccgggtcgatattggtccgtacactctgaacatcaagtgctacaggttggggaag
aacaaaattgggtcagcctttcccattgcagagaactga
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