Panicum virgatum (switchgrass): 120641455
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Entry
120641455 CDS
T07260
Name
(RefSeq) tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6-like isoform X1
KO
K03256
tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120641455
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120641455
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Gcd10p
Motif
Other DBs
NCBI-GeneID:
120641455
NCBI-ProteinID:
XP_039773532
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Position
7K:43015331..43021489
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AA seq
470 aa
AA seq
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MDAPPPIPREAWEGCSVLLDINDGDRLAFFRLTPAATVKIGNKTCSLQPLVGRPFGTLFR
VGADGLVPCAAADAPSRDDSMQDGADGQVQDETRDNRSLVDNNTAQNLSSDDIEAMKRDG
ATGDEIVEALIANSSTFGKKTVFSQEKYKLKKQKKYAPKVLLRRPSTRSICETYFKKNPA
RIGFMRVDTLSLLLSMANIGPYSDVLVVDMVGGLIVGAVAERLGGTGYVCSAYLGTVPSS
IDIIRMYNLSSDMVSRIVQVPLIELCSMQSSGNTPYVPSGNTEREVVKPGVVQDEDAQAS
LAQAVDTADEKAQLSTEQTTDMEISKPSLDVQDENSSLECKGGDGDSIASKFKPGKAPSP
EKMKYWNEHGFSSLIVAAPGHEVENFVADLLPLLSYSAPFAIYHQYLEPLAKCMHTLQVS
KRAIGLQLSEPWLREYQVLPSRTHPHMQMNAFGGYILSGIRIQSEQVGHQ
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgccgccgccgattccccgggaggcgtgggagggctgcagcgtcctcctcgac
atcaacgacggcgaccgcctcgccttcttccgcctcacccccgcagcgacggtgaagatc
gggaacaagacctgctcgctgcagccgctcgtggggcgcccttttggcaccctcttccgc
gtcggagctgacgggctcgtcccctgcgccgccgcagatgccccatcccgtgatgatagc
atgcaagatggtgccgacggccaagtgcaggatgaaaccagggacaataggtccctggtt
gataataatacagcccagaatttatctagtgatgacatagaggcaatgaagagggatggt
gcaactggtgatgagattgtggaagctttgatagcgaatagttcaacatttgggaagaaa
actgtattctcacaagagaaatacaagttaaagaaacaaaagaaatatgcgcctaaagtt
cttttacgacgcccttctacccgaagcatttgcgagacatacttcaagaaaaatccagct
cgaatagggtttatgcgagttgacacgctatctctcttattgtctatggcaaacatcggt
ccatattcagatgtgcttgtggttgatatggttggaggtttaattgttggagctgttgct
gaacgtttaggaggtacaggatatgtttgcagcgcatatcttggtacagtacccagctcc
atagacattataagaatgtacaatctgagcagtgatatggtcagcaggattgttcaggtg
ccacttattgaactatgctctatgcaaagttctgggaataccccttatgttcccagtggt
aacactgaaagggaggtggtcaagcctggtgtagtacaagatgaggatgcacaggcatct
ctagcacaggcagttgacacagcagatgagaaggcgcagttgtcaacagaacaaacaact
gatatggagatctcgaagccttctttggatgttcaagatgaaaactcttcattagaatgc
aaaggtggtgatggtgattcaattgcctccaaatttaaacctggaaaagcaccatcacca
gagaagatgaaatattggaatgaacatggctttagcagtttaattgttgctgccccgggc
catgaggtggagaattttgttgctgatctgcttccgttattgtcttattcagcaccgttt
gctatctaccatcaatatcttgagcctcttgcaaagtgcatgcacaccttgcaggtatca
aaaagggctattggattgcagctttctgaaccctggctacgtgaataccaggtgcttcca
tcacggactcaccctcacatgcaaatgaatgcatttggcggttatatcttgagtggcata
aggattcaaagtgaacaagtgggtcatcaataa
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