Panicum virgatum (switchgrass): 120641461
Help
Entry
120641461 CDS
T07260
Name
(RefSeq) protein argonaute 1B isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120641461
03036 Chromosome and associated proteins [BR:
pvir03036
]
120641461
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
120641461
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
120641461
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
120641461
microRNA pathway
RISC loading complex
120641461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
Gly-rich_Ago1
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
120641461
NCBI-ProteinID:
XP_039773545
LinkDB
All DBs
Position
7K:complement(43195223..43210129)
Genome browser
AA seq
1091 aa
AA seq
DB search
MICDLDMAMRVENGRPHQVPIMVRKKRTGPGGSGETSGESSGASGQGSSQRTERTQQHGG
GRGWVPQQGGRGGGQHQGRGGHYQGRGGPEPHHPGGGPPEYHPRDYQGRGGEYLGRGGPR
PRGGMPQPYYGGHRGGSVGRNVPPGPSRTVPELHQAPYVQYQAPMVSPSPSGSGSSSQPM
VEVSSGHVQQQFQQLALRGQTSTDQEIQVAPASSKSLRFPLRPGKGTYGDRCIVKANHFF
AELPDKDLHQYDVSITPEVTSRGVNRAVMGELVTLYRQSQLGGRLPAYDGRKSLYTAGPL
PFTSRTFEITLQDEEDSLSGGQGGKRRERVFRVVIKFAARADLHHLAMFLAGRQADAPQE
ALQVLDIVLRELPTARYSPVGRSFYSPNLGRRQQLGEGLESWRGFYQSIRPTQMGLSLNI
DMSSTAFIEPLPVIDFVAQLLNRDISVRPLSDSDRVKIKKALRGVKVEVTHRGNMRRKYR
ISGLTSQATRELSFPVDDRGTVKTVVQYFMETYGFSIQHTTLPCLQVGNQQRPNYLPMEV
CKIVEGQRYSKRLNEKQITALLKVTCQRPQERELDILQTVHHNAYYEDPYAQEFGIRIDE
RLAAVEARVLPPPRLKYHDSGRERDVLPRVGQWNMMNKKMVNGGRVSNWACINFSRNVQD
SAARGFCHELAIMCQISGMDFAPAPVLPPLTARPEHVERALKARYQDAMNILRPQGRELD
LLIVILPDNNGSLYGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRN
TVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSA
QAHRQELIQDLFKVWQDPQRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEGQFYQ
VLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRSGNILPGTVV
DSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRS
VSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASGARGPPPGGARSSRAAGSVAVRPLPAL
KENVKRVMFYC
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgatctgcgaccttgacatggcgatgcgggtggagaacgggcgcccccatcaagtgccc
atcatggtgaggaagaagagaactggccctggtggctctggagaaacttctggagagtct
tcaggggcttctggacaaggttcctcacagcgaactgagcgaactcaacaacatggggga
ggacgcggctgggtgcctcagcagggcggccgtggtggcggtcaacaccaaggccgtggt
ggacactatcagggccgtggagggccagagccacatcacccgggtggtgggccacctgag
tatcacccgcgtgactaccagggacgtggcggtgaatacctgggacgtggtggtccccgc
cccagaggtggaatgccacagccatactatggtgggcataggggaggtagtgttggacga
aatgttcctccaggtccatccagaacagttcccgagctgcaccaagccccatatgtccag
tatcaagccccgatggtttcaccatccccatcgggatccggctcatcctcacagcctatg
gtagaggtgagctctggacatgtccaacaacaatttcagcaacttgcacttcgcggccag
acttccacagaccaagaaattcaagtggcaccggcatcaagcaaatcgcttcggttcccg
ttgcgccctggcaagggtacttatggggacaggtgcattgtgaaggcaaatcatttcttt
gctgagcttcctgacaaagatcttcaccaatacgatgtatctataacacctgaggttact
tcacgtggtgtcaatcgtgctgtcatgggagagcttgtaacgctgtatagacaatcccaa
ttgggtgggcgtctacctgcatacgatggaagaaagagcctttatacagctggaccactg
ccatttacttctaggacatttgaaattaccttgcaagatgaggaagatagtcttagtggt
ggccaaggcggtaaaaggcgtgagagagtatttagggtggtgatcaaatttgctgcccgt
gctgatctccaccatttggctatgttcctagctggaaggcaagcagatgctcctcaagaa
gctcttcaagtgcttgacattgtactgcgtgaactgcctactgcgaggtattctcctgtt
ggtagatcattttattctccgaacttaggaagacgccagcaacttggtgagggtttggaa
agttggcgcggtttttaccaaagcataagaccgacacagatgggcctttccctgaatatt
gatatgtcatctactgcgtttatcgagcctctccctgtgattgattttgttgctcagctt
cttaacagagatatctcagttagaccattgtctgattctgatcgtgtgaagatcaaaaaa
gccttgagaggtgtgaaggtcgaggtcacacaccgtggaaatatgcgcagaaaatatcgt
atttctggcctcacttcacaagcaacaagagagctatcattcccagttgatgatcgtggt
actgtgaagactgtggtgcaatacttcatggagacgtatggttttagtattcaacacacc
actttaccttgcttgcaagtgggcaatcagcaaagaccaaattatctgcctatggaagtc
tgtaagatagttgaaggacagcgttactcaaagcgactcaacgagaaacaaatcactgct
ctactgaaagtgacctgtcagcgccctcaagagcgtgagctggacatcttacagactgtg
catcacaatgcatactatgaagacccgtatgcacaggaatttggtataagaattgatgaa
cgcctcgcagcagttgaagctcgtgttctgccaccaccaaggcttaaataccatgatagt
ggcagagagagggatgttttgccaagagttggccaatggaacatgatgaataagaaaatg
gttaatggtggcagagtcagcaactgggcgtgtattaacttttctcggaatgtgcaagat
agtgctgctaggggcttctgtcatgagctggctatcatgtgccaaatttctggaatggac
ttcgcccctgcgcctgtgctgcctccgctgactgcaaggccagaacatgttgagagagca
ttaaaggcacgttatcaagatgcgatgaacatactgagaccacaaggcagggaacttgac
ctgctgattgtaatactgcccgacaataatggttctctttacggggatctcaagaggatc
tgtgagactgatctaggattggtctcccagtgttgtctgactaagcatgtttttaagatg
agcaagcagtatcttgccaatgttgcactcaaaataaatgttaaggttgggggaaggaat
actgtacttgtagatgctttgacaaggagaatcccccttgtcagtgacagaccgactatt
atatttggtgctgatgttacgcatcctcatccaggagaagattccagtccttccattgca
gctgttgttgcttcgcaagactggcctgaggtcaccaagtatgctggactagtgagtgct
caagcccatcgccaggagctgattcaggatcttttcaaagtatggcaagatccacaacga
gggacagtaactggtggcatgatcaaggaacttctcatttcttttaagagggcaactgga
cagaaacctcagaggatcatattctacagggatggtgtcagtgagggacagttctatcaa
gtattgctgtatgaacttgatgccatcagaaaggcttgtgcatccttggagcccaattac
cagcctccagttacttttgtggtagttcagaagcggcatcacactaggttatttgctaat
aaccacaatgatcagcgtacggttgatagaagtgggaacatactgcctggcaccgtggtt
gattcaaagatttgccatcctaccgagtttgatttctacctgtgtagccatgctggcatt
cagggaacaagccgcccagctcattatcatgtcctgtgggatgagaacaagtttacagct
gatgagctgcagactctgacaaacaacctgtgctacacgtacgctaggtgcacccgctcc
gtgtcaattgtgcctccggcatactatgctcatttggctgccttccgagctcgcttctac
atggaaccagatacttctgacagcgggtcaatggcaagtggtgcccgtggccctccacca
ggtggggcacgcagcagcagggctgcagggagtgtcgccgttaggcccctgcccgccctc
aaggaaaatgtgaagcgcgtcatgttttactgctga
DBGET
integrated database retrieval system
