Panicum virgatum (switchgrass): 120641488
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Entry
120641488 CDS
T07260
Name
(RefSeq) RHOMBOID-like protein 2
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120641488
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
120641488
Peptidases and inhibitors [BR:
pvir01002
]
Serine peptidases
Family S54: Rhomboid family
120641488
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DUF2651
Epiglycanin_C
Motif
Other DBs
NCBI-GeneID:
120641488
NCBI-ProteinID:
XP_039773591
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All DBs
Position
7K:43544174..43546191
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AA seq
345 aa
AA seq
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MSNPDVEAGGPARAAPATTGIMPPPGRYSVVGNGNDSAPPYVAPSPFYYDNAAAHERHHW
SWLVPLVVIANVAMFVVVMFANNCPRGGVDCVGRGFLRRFSFQPLKENPLLGPSAATLQK
YGALDWYKVVHGSQAWRLESCTWLHAGLIHLLANMISLILIGVRLEQQFGFWKVGLVYLV
SGFGGSVLSVLFIRKGVSVGASGALFGLLGAMLSELITNWTIYTNRFAALVNLIIIAAIN
LAVGILPLVDNFAHIGGFATGFLLGFVLLIQPQFGWLEQPFGAKSKSKYKYKAYQIILLL
LALVLLAAGFAVGLVMVFRGENGNDHCSWCHYLTCVPTSSWKCDN
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccccgacgtggaggcgggcggcccggcgcgggcggcgccggcgacgacgggg
atcatgccgccgccggggcggtacagcgtggtcggcaacggcaacgacagcgcgccgccg
tacgtggcgccgtcgccgttctactacgacaacgcggcggcacacgagcggcaccactgg
tcgtggctggtgccgctggtggtgatcgccaacgtggccatgttcgtcgtggtcatgttc
gccaacaactgcccgcgcggcggcgtggactgcgtcggccggggcttcctccgccgcttc
tccttccagccgctcaaggagaaccccctcctcggcccctccgccgccacgctgcagaag
tacggcgccctcgactggtacaaggtcgtgcacgggagccaggcttggcggctggagtcg
tgcacctggctgcacgccggcctcatccacctgctcgccaacatgatcagcctcatcctc
atcggcgtccgcctcgagcagcagttcggattctggaaggtcgggctggtgtacctcgtc
tcgggcttcggcgggagcgtgctctcggtgctcttcatcaggaagggcgtctccgtcggc
gcctccggcgcgctcttcggcctcctcggagcgatgctgtcggagctcatcaccaactgg
accatctacaccaacagatttgcagccttggtgaacctgatcatcatcgccgccatcaac
ctggcggtgggcatactccccctcgtcgacaacttcgcgcacatcggcgggttcgccacc
ggcttcctcctcgggttcgtgctgctgatccagccccagttcgggtggctggagcagccc
ttcggtgccaagtcaaagtccaagtacaagtacaaggcgtatcagatcatcctcctgctt
cttgcactcgtcttgctggctgcagggtttgctgttggattggtcatggtgttcagggga
gagaacggcaacgatcactgcagctggtgtcactacctcacctgcgtgccgacgtcaagc
tggaagtgtgacaattga
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