Panicum virgatum (switchgrass): 120641496
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Entry
120641496 CDS
T07260
Name
(RefSeq) E3 ubiquitin-protein ligase BIG BROTHER-like isoform X1
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120641496
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120641496
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120641496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_16
zf_RING_Vps8
zf_RING_Vps8_fungal
zf-ANAPC11
zf-RING_Vps41
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
120641496
NCBI-ProteinID:
XP_039773597
LinkDB
All DBs
Position
7K:43778600..43782236
Genome browser
AA seq
250 aa
AA seq
DB search
MYTRRNTTGKKDAAVCYMNAPLPYAIEENHGGCFFDDDDDLAQVLQDQEILYQLFQGNNG
SSSSRNHSIPSSSYGHNRTSNERKPSGVVNYDYELQLAVDEALARELQEMEGQLAKTSLN
DNNGRKPTSSSASDRGNSSASRPPQVVEEDGIDPDNMTYEELQQLGEAIGTESKGLPESV
IALLPTSTYKIRIFSRNEKHDECVICCMAYKNRDRLTQLPCGHQYHQACVAKWLQINKVC
PVCNKEVFGS
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtacacgcggcgcaacacaactggaaagaaggatgcggctgtctgttatatgaatgcc
cctctaccgtacgccattgaggagaatcacggtggatgcttctttgatgatgacgatgat
cttgcacaagttcttcaagatcaggaaatattgtatcaattatttcaaggaaataatggt
agcagctcatcaagaaatcattcaattcccagttctagctatggtcataatcgaacatca
aatgaacgaaaaccatcaggagttgtaaactatgactatgagttgcaactggcggttgat
gaagctttagctagagagttgcaagaaatggagggccaactagccaaaacgtcacttaat
gacaacaatggaagaaagccgacatcctcttcagcatctgatagaggcaatagttctgca
agcagacctcctcaggtagtggaggaggatggaattgatcctgataatatgacttacgag
gaactacagcagttaggggaagctattggtactgaaagcaaagggctgcctgaaagtgtc
atagcactcttaccgacctcaacttacaaaattaggatattctcaagaaacgaaaaacat
gatgagtgtgtgatctgttgtatggcttacaagaacagagacaggctgactcaattgccc
tgtggacatcaatatcatcaagcttgtgttgccaaatggttacagatcaacaaggtatgc
cctgtttgcaataaggaggttttcggctcgtaa
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integrated database retrieval system
