Panicum virgatum (switchgrass): 120641580
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Entry
120641580 CDS
T07260
Name
(RefSeq) syntaxin-related protein KNOLLE-like
KO
K08486
syntaxin 1B/2/3
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120641580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120641580
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120641580
Membrane trafficking [BR:
pvir04131
]
SNARE
Syntaxin (Qa)
Stx-PM
120641580
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
120641580
Exosomal proteins of other body fluids (saliva and urine)
120641580
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
DUF6594
Piezo_THU9_anchor
NRD1_2
Motif
Other DBs
NCBI-GeneID:
120641580
NCBI-ProteinID:
XP_039773692
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All DBs
Position
7K:44939421..44940785
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AA seq
314 aa
AA seq
DB search
MNDLMTKSFMSYVDLKKAAMKDLEAGGDGIELPEPGAGGVTDERLRGFFQEAEAVKAEMA
AIRDALDRLHAANEEGKAVHQADALRAHRGRVNADIVAVLRRARGIRARLESLDRANAAQ
RRLSAGCREGTPLDRTRTAVTAGLRKKLKDLMLDFQALRQQMMSEYKETVERRYYTLTGE
VPEEEVIERIISDGRGEELLGAAVTEHGKGAVLAAVHEIQDRHDAAREVERSLLELHQVF
LDMAVMVETQGEKLDDIESHVANASHYVQGGNKELGKAREYQRSSRKRLCIGIIILLLLV
LLVIVPIATSFRKS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacctcatgaccaagtccttcatgagctacgtcgacctgaagaaggcggcgatg
aaggacctggaggcgggcggcgacgggatcgagctcccggagccgggcgccggcggcgtc
acggacgagcgcctgcgtgggttcttccaggaggcggaggcggtgaaggcggagatggcg
gccatccgcgacgcgctcgaccgcctccacgccgccaacgaggagggcaaggcggtgcac
caggccgacgccctccgcgcgcaccgcggccgcgtcaacgccgacatcgtcgccgtgctc
cgccgcgcccgcggcatccgcgccaggctcgagtccctcgaccgcgccaacgccgcgcag
cgcaggctctccgcggggtgccgcgagggcacgccgctggaccgcacgcgcaccgccgtc
accgcggggctccggaagaagctcaaggacctcatgctcgacttccaggcgctgcgccag
cagatgatgtccgagtacaaggagaccgtggagcgccgctactacacgctcaccggggag
gtccccgaggaggaggtgatcgagcgcatcatctccgacggccgcggcgaagagctcctg
ggcgccgccgtcacggagcacggcaagggcgccgtgctggccgcggtgcacgagatccag
gaccgccacgacgcggcgcgcgaggtggagcgcagcctcctggagctccaccaggtgttc
cttgacatggccgtcatggtggagacgcagggggagaagctcgacgacatcgagagccac
gtcgccaacgcctcccactacgtgcagggcggcaacaaggagctgggcaaggctagggag
taccagcggagcagccgcaagcggctctgcattggcatcatcatcctgctgctcctcgtc
ctcctcgtcatcgtgcccatcgccaccagcttcaggaagtcttga
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