Panicum virgatum (switchgrass): 120641626
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Entry
120641626 CDS
T07260
Name
(RefSeq) E3 ubiquitin-protein ligase RNF14-like
KO
K11971
E3 ubiquitin-protein ligase RNF14 [EC:
2.3.2.31
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120641626
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
120641626
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
120641626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RWD
IBR
IBR_1
FYVE
zf-RING_2
Zn_ribbon_19
FakA-like_M
Motif
Other DBs
NCBI-GeneID:
120641626
NCBI-ProteinID:
XP_039773749
LinkDB
All DBs
Position
7K:45486194..45490870
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AA seq
634 aa
AA seq
DB search
MPRKSSRARGVATQGPVGPAAAPRPPVKAGPPNPSPAAELPQAAPAAAEALERLHLDPAS
DGDPPPPPPPPVTEPEAPAPSQPPPVEASSSGRSEAGGSLEQEAVRKVHELAEAGGEEVP
LTDEEVRANDQRQEDELCALEAIFGDAVVILDRKGGQRCFQVHVHIEIPDAIDVSTRLNY
GDGKLKYGATSDADADDLVYKFRVEHLPPILLTFLLPASYPSHHAPLFTISTYWLDKGMI
SSLCRMLDMLWEEQQGMEVTYQWVQWLQSSSLSHLGFGNEIVLGKNDVTCDADKRACLDN
ASPDVIIPRMMRYNDNKHHEAFLHAIHDCMICFSECPGVDFIKLPCHHFFCWKCMQTYCK
MNVKEGNVVKLLCPDTKCEGAVPPNILKRLLGEDEFERWEGLLLQRTLDAMSDVVYCPRC
QTACLEDVGNEAVCSSCLFSFCTLCRNRRHIGEQCMSPEERLLILEKRQQSGQVQGDQMR
ILEELRSLKEIMKDAKQCPRCKMAISKTEGCNKMHCENCGEYFCYQCNRAITGYEHFKGS
CVLFPQEELDRWEMQMNQRVRRQVVAQAHAEMHALHGQVHPCPTCRQPSPKVGNNNHLFC
WACQKHFCALCHKPVPKPAQHYGPKGCKQHTADP
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggaagtcgtcgagggcgaggggcgtggccacgcaaggccccgttggccccgcg
gcggcgccgaggcctcccgtcaaggccggccccccaaaccctagccccgccgccgagctg
ccccaggccgcccccgccgccgccgaggccctggagcgcctccatctcgaccccgcttct
gatggtgatccgccgccgccgcctcctcctcccgtgaccgagcccgaggcacccgcgccg
tctcagccgccgccggtggaggcgtcgtcgtctggaaggtctgaggcgggcgggagcctg
gagcaggaggctgtgaggaaggtgcacgagcttgcggaggctggtggggaggaggtgccg
ttgactgatgaggaggtgcgcgccaatgatcagaggcaggaggacgagctctgtgccctt
gaagccatttttggggatgctgtagtaattttggacagaaagggaggccagcggtgtttc
caggtccatgttcacattgagattccagatgctatagatgtatcaacaaggctcaattat
ggtgatggaaaattaaaatatggggcaacatctgacgctgatgctgatgaccttgtttac
aagtttagagttgagcatttgcctccaatcctgctaacatttcttctgcctgcatcatac
ccaagtcaccatgccccccttttcactatctccacatattggcttgataaagggatgatt
tcgtcattatgtcgcatgcttgatatgctttgggaagagcaacaggggatggaagtaaca
tatcaatgggtgcagtggctccaaagttcttccctttctcacttagggtttggtaatgag
atagttttgggcaagaatgatgtaacatgtgatgcagataagcgtgcttgtctagataat
gcttcaccagatgttataattccaaggatgatgagatacaatgacaataaacatcatgaa
gctttcttacatgctatccatgactgcatgatttgtttcagcgagtgtcctggtgtcgat
ttcatcaaacttccatgtcatcatttcttttgctggaaatgcatgcaaacatactgcaaa
atgaatgttaaggagggaaatgttgtgaagttgctatgtcctgatacaaaatgtgaaggt
gctgttcctcctaatatattgaaaaggctgcttggagaggatgaatttgaacgttgggag
ggattactgcttcaaagaacccttgatgccatgagtgatgttgtctattgtccaagatgc
caaactgcttgcttggaggatgtaggcaatgaagcagtgtgttcaagttgtttattcagc
ttctgcactctctgtagaaatcgccgtcatattggggagcaatgtatgtctccagaagaa
agactccttatcttggagaaacgccaacaatctgggcaagtgcaaggagatcagatgaga
attcttgaagaattacgaagcctgaaggaaattatgaaggatgcaaaacagtgcccaaga
tgcaagatggccatatctaagacagaaggatgcaataagatgcattgtgagaactgcggg
gagtacttctgttatcaatgcaaccgtgcgattactggatatgagcatttcaaaggttct
tgcgtgctttttcctcaggaggaactggacagatgggaaatgcagatgaatcaaagggta
cggcgccaagttgttgcacaggcacatgctgaaatgcatgcactgcacggtcaagttcat
ccttgtcctacatgccgtcaaccatctccaaaggttggaaacaacaaccacctgttctgc
tgggcatgccagaagcatttttgtgccttgtgccataaacctgtcccaaagccggcacag
cattatggtcccaaaggttgcaagcagcatacggcagatccctga
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