Panicum virgatum (switchgrass): 120641669
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Entry
120641669 CDS
T07260
Name
(RefSeq) probable galacturonosyltransferase 9
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120641669
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120641669
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120641669
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120641669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Perilipin
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
120641669
NCBI-ProteinID:
XP_039773804
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Position
1K:51302704..51304631
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AA seq
490 aa
AA seq
DB search
MAGGRASARRRAVVAAVTTLILLASVSFLLSATATSSAAANSPASRLAVVQRHAEDHAAV
LAAYTAHASHLGALSASQTDAFLSISSRLSALASRLSVSTVGALEKEVKAQVKRARSLAG
AAKEAFDTQSKIQKLSDTVFAVGQQLLRARRAGVLNARIAAWSTPKSLHCLAMRLLEARL
ANASAVPADPPAPPPQFADPSLHHYAVFSDNVLAVSVVVASAARAAAEPSRHVFHVVTAP
MYLPAFRVWFARHPPPLGAHVQLLSVSDFPFLNASYSPVLRQIEGGSRDVALLDYLRFYL
PEMFPALRRVVLLEDDVVVQRDLAGLWRVDMGAAVNAALHTCFGGFRRYGKYLNFSDPVV
QESFSPRACAWSYGVNVFDLQAWRREQCTEQFHRFMEMNENGTLWDPASVLPVGLMTFYG
KTKPLDKSWHVTGLGYNPHIRPEDISGAAVIHFNGNMKPWLDVAFNQYKHLWTKYVDTEM
EFLTLCNFGL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggccggcggcagagcatccgcgcggcgtcgcgcggtggtcgcggccgtcaccacgctg
atcctcctcgcctccgtctcgttcctcctgtccgccacggccaccagctccgccgccgcg
aactccccggcctcgcgcctggccgtcgtccagcggcacgccgaggaccacgcggccgtc
ctggcggcctacacggcccacgcgagccacctcggcgcgctctcggcctcccagacggac
gccttcctctccatctcgtcgcgcctctccgccctggcctcccgcctctccgtctccacc
gtgggggccctggagaaggaggtcaaggcccaggtcaagcgcgcgcgctccctcgccggc
gccgccaaggaggcgttcgacacgcagtccaagatccagaagctctccgacaccgtcttc
gccgtggggcagcagctcctccgcgcccggcgcgcgggcgtgctcaacgcccgcatcgcc
gcgtggtccacgcccaagtcgctccactgcctcgccatgcgcctcctcgaggcccgcctc
gccaacgcctccgccgtccccgccgacccgcccgccccgccgccgcagttcgccgacccg
tcgctccaccactacgccgtcttctccgacaacgtgctcgccgtctccgtcgtggttgcc
tccgcggcgcgcgcggccgccgagccctcgcgccacgtcttccacgtggtcaccgcgccc
atgtacctgccggcgttccgcgtctggttcgcgcgccacccgccgccgctcggtgcgcac
gtgcagctcctgtccgtctccgacttcccgttcctgaacgcgtcctactcgccggtcctg
aggcagatcgagggcgggagcagggacgtggcgctgctggactacctccgcttctacctc
ccggagatgttcccggcgctgcggagggtggtgctcctggaggacgacgtggtggtgcag
agggacctggcggggctgtggcgcgtcgacatgggcgccgccgtgaacgccgcgctgcac
acctgcttcggagggttccggcgctacggcaagtacctcaacttctcggaccccgtcgtg
caggagagcttcagcccccgcgcgtgcgcctggtcctacggcgtcaacgtcttcgacctc
caggcgtggcgccgggagcagtgcaccgagcagttccaccgcttcatggaaatgaatgag
aacgggacgctctgggatccggcgtccgttctgccggtcgggctcatgacgttctacggc
aagacgaagccgctggacaagtcatggcacgtgacgggactcgggtacaacccgcacatc
agacccgaggacatcagcggagccgccgtgatacacttcaacgggaacatgaagccatgg
ctggacgtcgccttcaaccagtacaagcacctctggaccaagtacgtcgacaccgagatg
gagttcctgacgctctgcaactttggactctga
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