Panicum virgatum (switchgrass): 120641699
Help
Entry
120641699 CDS
T07260
Name
(RefSeq) putative RNA methyltransferase At5g10620 isoform X1
KO
K00783
23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:
2.1.1.177
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120641699
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.177 23S rRNA (pseudouridine1915-N3)-methyltransferase
120641699
Ribosome biogenesis [BR:
pvir03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
120641699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPOUT_MTase
Motif
Other DBs
NCBI-GeneID:
120641699
NCBI-ProteinID:
XP_039773833
LinkDB
All DBs
Position
7K:complement(46561587..46566922)
Genome browser
AA seq
197 aa
AA seq
DB search
MHMWGPLLPKQGPWCARPISSCPTFPWDAGRRSKYSGQSVRAVPMRLLTVGKKRSRGTQL
LVEEFKEKLGYYCDFEDTLIRSNPKLTSDIKVQVEAEDTAMMQQLKPEDFVVVLDENGKD
VISEQIADLIGDAGNTGSSRLTFCIGGPYGLGVQVRERADATIRLSSLVLNHQVALIVLM
EQLYRAWTIIKGQKYHH
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgcatatgtggggcccattactccctaagcaaggaccgtggtgcgcccgccccatctcc
tcttgtcctacttttccttgggatgcaggcaggagatccaaatactcgggacaatctgtg
agggcagtgcctatgcgtttgttaacggttggaaagaagaggtctcgagggacacagctt
ctcgttgaagaattcaaagagaagctcggatactactgcgattttgaagacacccttatc
aggtccaatccaaaacttacaagtgatattaaggttcaagtagaggcagaagacacagct
atgatgcagcaactcaaacctgaagattttgtggttgtgttggatgaaaacgggaaggat
gtcatatctgagcagatagctgatctgattggggatgctggcaacacaggatcatcaagg
cttacattttgtattggtggaccatatggtcttggggtacaagtgcgagagcgtgcagat
gcaaccattaggttgtcctcattagttttgaatcaccaagttgctttaattgttctaatg
gagcagctttacagggcatggactataataaaaggacagaagtatcaccattaa
DBGET
integrated database retrieval system
