Panicum virgatum (switchgrass): 120641791
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Entry
120641791 CDS
T07260
Name
(RefSeq) peroxisome biogenesis protein 6-like
KO
K13339
peroxin-6
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120641791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120641791
Membrane trafficking [BR:
pvir04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
120641791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_5
AAA_lid_3
nSTAND3
AAA_22
RuvB_N
RNA_helicase
AAA_17
AAA_28
Rad17
AAA_7
AAA_14
ATPase_2
NPHP3_N
Cytidylate_kin
TsaE
AAA_25
AAA_18
DUF815
Parvo_NS1
AAA_33
AAA_24
AAA_6
AAA_2
Sigma54_activat
TIP49
AAA_11
Mg_chelatase
PhoH
IstB_IS21
PEX6_4th
ATPase
AAA_3
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
120641791
NCBI-ProteinID:
XP_039773958
LinkDB
All DBs
Position
7K:complement(47403503..47409465)
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AA seq
927 aa
AA seq
DB search
MVERPQRRKPLVLASTQALLDSLPGDRPPPPPQEPVRLRAGVLRFPSWGGAEFGELATFV
ALPAPALRRLAVVTGTPVLVKNADNNVGRIVKAILLDRPSLDESGTEQTDHAASASPHGR
AMGILPFRSFPATGFASVDEDIAYVSPLLAFNLGLHVSCLKLLIQKGQEPFKFCSRSEEL
HSASNAGSDLSLHLDLLPCAQVPKYASHLRVSVVRIPECGVLASLKINSSFGESDYQDMV
DQALNEYFKFDRFLARGDVFCIRNNWNCGMSSCLACNRQDDNLRPRNMIYFKVTSMEPSD
EPILRVNCNETALVLGGAASAAIPPYSFFAASGDSLPLHGEIVEHLASIIAPALCPSDIL
PKIKFSTFIYGPSGCGKRTVVRHVASHLGLHVVECSCHDLMTSSESGAPAALTAAFKESQ
KYSPCIMLLRHFDAIGNASSNEGPESEQSGIASNIESVIKQYTGQSWAATDSMPGRDVNG
ISYPVEPEYVSSLQIILIATADSSEGMQQSIRRCFRHEIDMKTMNEEQRKKLISETLQGI
ATVADESIDDKFVKDLAAQTSGFMPRDILALVADSGVSFAHKIAAEKDSKGISDHEEILP
ESSSATQNEEIHFCKEYILCSLERAKKRNRAALGTPKVPNVKWEDVGGLEEVKKVILDTI
QLPLMYKHLFSSKLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYVGE
SEKNVRDIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNS
QDLFIIGATNRPDLLDSALLRPGRFDKLLYVGVNTDASYRERILKAQTRKYKLHSNVSLL
SVAQRCPPNFTGADIYALCADAWFHAAKRSVKTFEIDPSRNNDVSAEEVIVEIDDFMTVL
GDISPSLSLEELQNYEQLRQKIEGPSR
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggtggagaggccgcagcggaggaagccgctggtgctcgcctccacgcaggcgctcctc
gactcgctcccgggggaccgcccgccgccgccgccgcaggagccggtgcgcctccgggcc
ggcgtcctccgcttcccgtcgtggggcggcgccgagttcggggagctcgcaaccttcgtc
gccctccccgcgccagcgctccgaaggctcgcggtcgtcaccggcacgcctgtgcttgtc
aagaatgctgacaataatgtcgggagaattgttaaagcaatattacttgatcgcccatct
cttgacgagtctgggacagaacagactgatcatgcggcatctgcctctcctcatggtcgt
gctatgggtatcttaccttttcgttcgtttcctgctactggttttgcatctgtggatgaa
gatatcgcttatgtcagcccacttttggcattcaacttgggattgcatgtttcttgtctg
aagcttcttatccaaaaaggacaggagcctttcaagttttgttctcgatctgaagagctt
cattctgcttccaatgctgggagtgatctttcccttcacttagaccttcttccatgtgct
caagttcctaaatatgcttcacatttacgggtttctgttgtgaggattcctgaatgtggt
gtgcttgcttctttaaagataaattcatcctttggagaaagtgactaccaagacatggtg
gatcaagctttgaacgagtactttaagtttgataggttcctagcaagaggggatgtcttt
tgcatacggaacaattggaattgtggcatgagctcctgtctagcatgcaataggcaggat
gataatttgcgtcctcgtaatatgatctactttaaggtgacaagcatggaaccatcagat
gaacctattcttcgtgttaattgcaatgagacagcccttgtgcttgggggagctgcttct
gctgcaatccccccttactccttctttgctgcttctggtgactcacttcctttgcatggt
gaaatagtggagcatttagcctctatcattgccccagcattatgcccttcagatatatta
ccaaaaatcaagttttccacttttatatacggcccttcaggatgcggaaagcgcacagtg
gtgaggcatgttgctagccatcttggtctgcacgtggttgagtgtagctgtcatgatctc
atgacttcgtcagaaagtggtgcacctgctgcacttacagctgccttcaaagaatctcag
aagtattccccttgtataatgcttcttcgacactttgatgcaattgggaatgcatcctcc
aatgagggcccagaatctgagcaatctgggattgcgtcaaacattgaatctgttatcaag
cagtacactggacaaagttgggctgctacggactcgatgccaggaagagatgtaaatggg
atctcataccctgtggagcctgaatatgtaagctctcttcagattatactaattgcaact
gcagacagttctgaaggaatgcaacaatcaattaggcgatgtttccgccatgagattgac
atgaagactatgaatgaagagcagagaaagaaactgatatctgagacacttcaaggcatt
gcaacagttgcagatgagagtattgatgacaagttcgtaaaagacttagcagcacaaacg
tcaggattcatgccgagagacatacttgcactggttgcagattctggtgtgtcttttgca
cataaaattgcagcagagaaagatagcaaaggaatcagtgatcatgaggagatccttcca
gaaagctcttctgccactcaaaatgaggaaatacatttctgcaaagaatatattctgtgt
tccttggaacgagctaagaaaaggaatcgtgctgcactgggcacacccaaagttcccaat
gtcaaatgggaggatgttggtgggctagaggaagtgaaaaaggttattctagatactatt
cagttgccactgatgtacaaacaccttttttcttctaaattgcggaagcgatcaggtgtc
ctgctttatggacctccaggaacagggaagaccttattggcgaaagcagtagctactgaa
tgctcgttgaactttcttagcgtgaaaggtccagaactgataaacatgtatgttggagaa
tcagagaagaatgttagggacatttttgagaaggctagatctgcacgcccttgtgtcatt
ttctttgatgagcttgattccctagctccagcacgaggatcctcggcagattctggtggt
gttatggacagagttgtttcccagttacttgtggagatagatgggttgagcgataacagc
caggaccttttcattattggggctaccaataggcccgaccttcttgattctgctcttctt
cgccctggacggtttgataagcttctctatgttggtgtaaatactgatgcatcatacagg
gaaaggatccttaaagcacagacgcgcaaatataagctccacagtaatgtttctctcttg
tcagttgctcagcgttgtcctccaaactttaccggtgccgatatttatgcactgtgtgca
gatgcatggtttcatgcagcaaagagatccgttaaaacatttgaaattgatccttcaaga
aataacgatgtcagcgctgaagaggtcattgttgagattgatgattttatgacggtatta
ggagatatatcaccatcactatcactggaggagcttcagaactacgaacagttgaggcag
aagattgaagggccttctagatga
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