Panicum virgatum (switchgrass): 120641805 Help Entry 120641805         CDS       T07260                                  Name (RefSeq) SART-1 family protein DOT2-like   KO K11984   U4/U6.U5 tri-snRNP-associated protein 1 Organism pvir  Panicum virgatum (switchgrass) Pathway pvir03040   Spliceosome Brite KEGG Orthology (KO) [BR:pvir00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     120641805  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:pvir03041]     120641805    04121 Ubiquitin system [BR:pvir04121]     120641805 Spliceosome [BR:pvir03041]  Complex B   U4/U6.U5 tri-snRNP components    U4/U6.U5 tri-snRNP specific factors     120641805  Complex C    U4/U6.U5 tri-SnRNP specific factors     120641805 Ubiquitin system [BR:pvir04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     120641805 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SART-1 Motif Other DBs NCBI-GeneID:  120641805 NCBI-ProteinID:  XP_039773982 LinkDB All DBs Position 7K:47595539..47601398 Genome browser AA seq 837 aa AA seqDB search MGAADDSRDAALDEMEVDGGERHRDRERRDRHRRDEKEHHGSGRRDREREKDKDDRRREK DDGKHRDRDRERERERDKDKDSKHRDRDKEPERDRGRDRDRDRAKDRERDRGKDWEKEPE RERDKERERRDRDKERSRNRDKDKDRAERGDREREDREREKSRGKGRGEDDVDLSKGDEE DHKPRVDASGEAEQPATAELRDRIARAKEERLKDKKEGGILDSDDGVSEILSWVGKSRKL DEKRQAEKEKALLLARALEEQDNILADNGDDDDEEEEDKQVGDHLSGVKVLHGLDKVLEG GAVVMTLKDQSILADGDINEEADMLENIEIGEQKQRDEAYKASKKKGTYDDKFNEDSSSK KSMLSHYDDPMEDEGVTLDEGGRFTGEAEKKLEELRKRIEGGNVQKKTEDLTSTTKVSTD YFTPDEMLQFKKPKKKKSLRKKKKLDLDAIEAEAIASGLGAADRGSRNDAKRQSAREEEQ KADAVKRSSAYEAAIAKAEEASRALRPEKPSKPAEEELVFGDDYEDLQKSLEQARKLALR KKEEAAGPLAVVELATATKGQEGTDTTEGDSQQSKVVITEMEEFVWGLQLNQETRKPEDD DVYMDEDDDATPSDNLVKDDTNGLAAMDEDAQAEKPVKVEEEVKPDEVIHEVAVGKGLAG ALKILKERGSLNEGTDWGGRTTDKKKSKLVGVEDGPKDIRIERMDEFGRVMTPKEAFRDL SHKFHGKGPGKMKQEKRQKKYQDEMKTKRMKSSDTPLMAAEKMREAQARNQTPYLILSGN AKTSQASDANGFATVEKEQPGSLTPMLGDKKVEHFLGIKRSAKPGSLPPPVPKKPKN NT seq 2514 nt NT seq  +upstreamnt  +downstreamnt atgggtgctgctgatgactcgagagatgcggcgttggacgagatggaggtggatggtggt gagcggcaccgggacagggagagaagggacaggcacaggcgggacgagaaggagcaccat ggcagtggcagaagggacagggagagggagaaagataaggatgataggaggagggagaag gatgacggcaagcatagggatagggatagggagagggagagggagagagacaaggataag gatagcaagcacagggacagggataaggagccagaacgtgatcgtggccgtgaccgcgac cgcgaccgagccaaggatcgggagagggatcgaggcaaagattgggagaaggaaccagag cgggagcgggataaggaaagggaacggagggacagggacaaggagagaagccgcaacaga gacaaggacaaggatagggcggagaggggagacagggagagggaggatagggagcgtgag aagtcaagggggaagggtcgtggagaagacgatgtagatctgtccaagggcgatgaggag gatcataagccgagagttgatgcttcaggggaggctgagcagcccgcaaccgcagagctc agagatcgcattgcgagggcaaaggaagaaagattgaaggacaaaaaggaaggaggaata ctggacagtgatgacggggtttctgagatattgtcatgggtgggaaagagtcgtaaactt gatgagaaaaggcaagctgaaaaggagaaagcattgcttcttgcacgagcattggaggaa caggataatatcttggcagataatggcgacgacgacgatgaggaagaggaagataaacaa gttggagaccacttatctggtgttaaggttcttcatggtcttgataaggtattggaaggt ggtgcagttgtcatgactctcaaagatcagagtattcttgcagatggggatatcaatgaa gaggctgatatgcttgagaacatagagattggtgagcagaaacaaagagatgaagcttat aaggcttcaaagaagaaaggaacttatgatgacaagttcaatgaggattcatcgtcaaag aaatctatgctctcacattatgatgaccctatggaagatgagggagtgacacttgatgaa ggtggacgtttcaccggtgaagcagaaaagaagctagaagagctccggaaaaggattgaa ggtggtaatgtccagaaaaagacagaagatcttacttccaccacgaaggtgtcaacagac tattttacccctgacgagatgcttcagtttaaaaaaccaaagaaaaagaaatcccttagg aagaagaagaagctggacctggatgcgattgaagcagaagcgattgcttctggattgggg gcagctgatcgtgggtccaggaacgatgctaagagacaatctgcaagggaggaagagcag aaggctgatgctgtaaaaagaagcagtgcgtatgaagctgccattgcaaaagctgaagag gcatcaagggcattgcgtccagagaagccttctaaaccagctgaagaagaacttgttttc ggtgacgattacgaagatctgcagaaatctctggagcaagcaagaaagttagccctaagg aagaaggaagaggctgctggtccgctggctgtagttgaactggctactgcaaccaagggc caagagggtacagataccacagaaggagattcacagcaaagtaaggttgttatcacagag atggaagagttcgtgtggggactacaactgaatcaagaaacacgcaagccagaagatgat gatgtgtatatggatgaagatgatgatgccacgccttcagataatcttgtcaaagatgac acaaatgggttagcagcaatggatgaggatgctcaggcagaaaaaccagtgaaggttgag gaggaagtcaaaccagatgaggttatacatgaagttgcagtgggtaagggtttggctggt gctttgaagattcttaaggagcgaggaagcctcaatgagggcactgattggggaggcaga actacagacaagaaaaagagtaagcttgtgggtgtcgaggatggacctaaagatattcgt attgaaagaatggatgaatttggtcgagtgatgacacctaaggaggcattccgggatctt tcacacaaattccatggtaagggtccaggaaaaatgaaacaagaaaaacggcagaagaag taccaggatgagatgaaaaccaagcggatgaaatcttctgacacacctttaatggccgcg gaaaagatgagagaggcccaagctcgcaaccaaacaccatacctcattctaagtggcaat gcaaaaacaagtcaagcaagtgacgctaacggctttgctaccgtggagaaagagcaacct gggagcttgacgcccatgcttggggacaaaaaggtcgaacactttctgggcatcaaacga agtgccaagcctggaagcttgcctccgccagtcccaaagaaaccgaagaactga

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