Panicum virgatum (switchgrass): 120641813
Help
Entry
120641813 CDS
T07260
Name
(RefSeq) RINT1-like protein MAG2 isoform X1
KO
K20474
RAD50-interacting protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120641813
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
120641813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Motif
Other DBs
NCBI-GeneID:
120641813
NCBI-ProteinID:
XP_039774004
LinkDB
All DBs
Position
1K:complement(51396916..51400696)
Genome browser
AA seq
787 aa
AA seq
DB search
MEAAAPPPPLPLLPDFNPGVRCFLDARFRSAADLATAADVEAEIRGRCSELEALVSDLSV
RIYEAAAAYSSCREAAGLALRGVRVGLGALKASISTGIGEEVEVGTEKMQFEQLPALASE
VARVEMVREYAETALKLDSLVGDVEDAVSSSVSRKLKSVGDNSEKTHHVVIGYLKNIEDI
LASVTTTRTQWACLLSAVDHRVDRSLAILRPQAIVDHRALLSSLGWPPSLAGSKFSSIDS
GKQAEIVNPLFSMTGDLKSKYSESFLSLCYLQELQKRRKARQLKGHNVGNQLRQPLWVIE
ELVNPISTAAQHHFSKWTDKPEFVFALSYKIIRDFVDSMDEILQPLVDKAKLIGYSCREE
WISGMVIALSTYLAKEIFPKQIELLQESSSGDAGCMPYQARVSWLSLVDLMISFDKRTQD
LISGTGLLLTVRDDDNWQRISVLSVFCDRPDWLEVWAEIERQETLDKLKSAMELEKNWST
RNQGTMLEYGSDDYKSPVITTAVQQSLSLLIDRARPVPSIALRAEFIRMSASPIISEFLG
YMLRRCQEAEGLTALADDNALLKVSQSINAARYFESTLTEWCEDVFYLEMENLSVNGEGG
CIFQQEINHLKEFGVEWVNKITTVILRAFDSRSRDYLKNKRQWLEKSEGPAVSRAFIESL
DYMQGQLSKLEGGLNALDFVTVWRSVASGVDQLLFAGIFTGGTKISNGGVERLEGDLSVL
FAVFSAWCLRPEGFFPRLSEGLRLLKVDEQQVRDGVFTDKNWLRQHGIRHLTAADTEKVI
KNRVYEA
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggcagctccaccacctccgctcccgctcctcccagacttcaacccaggggtc
cggtgcttcctcgacgcccggttccgctcggcggccgacctcgccacggccgccgacgtt
gaggccgagatccgcgggcgctgctcggagctcgaagccttagtatccgacctgtccgta
cgcatatacgaagctgccgcagcgtactcgtcttgccgcgaggccgctggtttggccctt
cgtggcgtccgcgtcgggcttggtgccctcaaagcctccatctccacagggattggagaa
gaggttgaggttggaacggagaagatgcagtttgagcaactccctgctctagcctccgag
gtggcgagggtggagatggtcagagagtacgccgaaacggctctaaagcttgacagtttg
gtgggcgatgtagaagatgctgtatcttcttctgtcagtagaaaactgaaatctgttggg
gacaattcagagaaaacacatcatgttgtgattggatatcttaaaaacatagaagatatt
ttagcttcggtaaccacgactagaacacaatgggcttgccttctatctgccgtggatcac
agagtggaccgatctttagctatactaagaccacaagccattgttgatcatcgagctctt
ctgtcatcccttggttggcctccttcattggctggctccaaattttcaagtattgattca
ggaaaacaagcagagattgtgaacccattattttcaatgacgggtgacttgaagagcaag
tattctgagagctttctttcactatgctacttgcaggaactgcagaaacgcagaaaagct
cgacaactgaaagggcataatgtgggcaatcaattacggcaaccattatgggtaattgaa
gagctagtaaatccaatatctacagcagcacaacaccacttctcaaaatggactgacaag
cctgaatttgtttttgctctttcttataagataattagagattttgttgattcgatggat
gagattctacagccccttgtggataaggccaaacttattgggtatagttgtagagaggag
tggatttcaggaatggtcattgcattgtctacatacttggcgaaagagatatttcctaag
cagattgaacttcttcaagaaagtagctcaggcgatgcaggctgcatgccgtatcaggct
agagtctcatggctcagtcttgttgatctgatgatatcttttgacaagcgaactcaagat
ttaatctcaggtacaggactcctacttacggtaagggatgatgacaattggcagcggatc
tcagtcctctctgtcttctgtgatcggccagattggcttgaagtgtgggcagagattgag
agacaagagacccttgataaactgaaatcagcaatggagttagagaaaaattggagtaca
aggaatcaaggaacaatgcttgagtacggatcagatgattacaagtctccagtaattacc
actgccgttcagcagagcttgtctttgctaattgatcgtgctcgtcctgtcccaagcatt
gcacttagggcagaattcattaggatgtctgcttctcctattatatctgaattccttggt
tacatgctccggaggtgtcaagaagccgagggactaactgctctggcagatgataatgct
ctgctcaaggtatctcaatccatcaatgctgctcgatactttgaatccacgttgacagaa
tggtgtgaggatgttttctatcttgaaatggaaaatttatctgtaaatggtgagggtggg
tgtatctttcagcaagagataaatcatctgaaagagttcggagtggaatgggttaacaag
attaccactgtcattttacgtgcatttgattctcgttctcgggattatctgaaaaataag
aggcagtggctggagaaatcagaggggcctgctgtatccagagccttcatagaatcttta
gactacatgcaagggcagctatctaaactggaaggtggcctaaatgcccttgattttgtg
accgtatggagaagtgtcgcaagtggggtagaccagctgcttttcgccggcattttcaca
ggcggcacaaagattagcaatggtggagtagaaaggcttgagggtgacctgagcgttttg
tttgctgtattttcagcgtggtgtctaaggcccgaaggcttcttcccaagactgtccgag
ggactgaggttactgaaggttgacgagcagcaggtaagagatggcgtgtttacagataag
aattggttgaggcaacatggtattaggcatctgacagctgctgacactgagaaggtaata
aaaaaccgggtgtatgaggcatga
DBGET
integrated database retrieval system
